Echinops telfairi (small Madagascar hedgehog): 101648636
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Entry
101648636 CDS
T08707
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03013
Nucleocytoplasmic transport
etf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101648636
09122 Translation
03013 Nucleocytoplasmic transport
101648636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101648636
03041 Spliceosome [BR:
etf03041
]
101648636
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101648636
Spliceosome [BR:
etf03041
]
Complex C
Other components
EJC/TREX
101648636
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101648636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
101648636
NCBI-ProteinID:
XP_030743201
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MSRALVPHVPPVISVMDTCRGPGGSDSQRPSGTVEPLQKIFQAIVFVDMIATFGSPGDLL
IQNADLLTSSRKLQPLPSNAGVAVTAACLLASPTHTSCGEVLLSPFRATETLCVTEHNTA
GSCAIPTTRAPSSPTTTLFSLPEARKRLTKSTREALNNKNIKPLLNTFTQLPGSENEKKK
CTLDQAFRGVLEETAINHSSCENVLAIISLAIGGVPEGICTASTPSVLLGDVLDGLPLDQ
CDTIFTFVEKDVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFP
LSEKSGLHLQSQFNLENVTVFNTHEQESALGQKHPEDREEGVAVEEGEMGADEAPTICSL
PIDYNLCRNFWSLQDYFRNAVQCYEKISWKTFLKYSKEVLAVFKSYKLDDTQASRKKMNE
LKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNSVXTDE
QPLWIEDTTKSDYQLLAETPPDGERFSKMLXHILNTEENWNSWKNEGCPRFVKERSSDSR
PARVLRKRRAPEDFLGKGPNRKIHMGNRELTRLWHLCPDNMEACKSETREYMPTLEEFFE
EAIEQADPENMVESEYKAVNNSNYGWRALRLLARRSPHFFQPTNPQFKSLPGYLENVVIK
LAKELPPPSEEIKTGEDEDEEDEDALRKENESPGVRRDKPGTGEQIEFFANKLGEQRKVL
APFLELKDSEIRTVTLILELLKLAVCLGIAVGLHLKPQASPGVLKKWIPVLKYLSPSELT
VIQRQGPTKLPVKPVGATGALLTMPLPHFASITPKKKLSVSQDFLLISASIAILNLGRLR
KPVKLKAVSGVLQVSPIYPGVFTQQMVHMATLQMAKFTRPLKDGGTYFLGFWVGNFTA
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggcacttgttccacacgtgcctcctgtcatatctgttatggacacttgccgt
ggtccaggtggctctgactcacagcgacccagtgggacagtagaaccgctccagaagatc
ttccaggccatcgtctttgtagatatgattgccacatttggctcccccggcgatttactg
attcagaatgctgacttgttaaccagcagtcgaaagcttcaaccactgccctccaatgca
ggcgtggctgtgactgctgcctgcttgcttgcctctcccacccacacctcctgtggtgaa
gtactgttgagtccgttccgagccacggagaccctatgtgtaactgaacataatactgcc
gggtcctgtgccatccccacaactcgtgctccgtcttctccgacgacgacgctcttcagt
ttgccagaagcgcggaagcgactcacgaagtctaccagagaagccttgaacaacaaaaat
atcaagccattgttgaataccttcacccagttacctggcagcgaaaatgaaaaaaaaaaa
tgtactcttgatcaagctttcagaggtgttctagaagagactgctataaaccattcatcg
tgtgaaaatgttctagctattatttctcttgctattgggggcgtacctgaaggtatctgc
actgcgtctacaccttccgtgctgctgggagatgttttggatggtcttcctttggatcag
tgtgacacaatattcacttttgtggaaaaagatgttgccacttggaaatccaacactttc
tattctgcgggtaaaaattatttactacggatgtgtaatgatctccttagaagattatcc
aaatcccagaatacagtcttctgtggacgaattcaactctttttggccaggcttttccct
ttatctgaaaaatcaggtcttcacctacagagtcagtttaatctggaaaatgtcactgtt
ttcaatacccacgagcaggaaagcgctctgggtcagaagcacccggaggacagagaagaa
ggagtggctgtagaagaaggtgaaatgggagctgatgaagcgccaacaatttgctccctt
ccgattgattacaacctatgtagaaatttctggtcacttcaggattacttcaggaacgct
gtgcaatgttatgagaagatttcatggaaaacttttctcaagtattccaaagaagtttta
gctgttttcaaaagttataaattagatgatacacaagcctcaaggaaaaagatgaacgaa
ttaaaaacaggaggagaacatgtatattttgcaaaatttttaacaagtgaaaagttgatg
gatttacagctgagtgacagtaactttcgtcgacacatcctgttgcagtacctcatttta
ttccaatatctcaaagggcaggtcaaattcaaaagttcaaactctgtctgaactgatgag
caaccactctggattgaagatactacaaaatcagactatcaactactagctgaaacccca
cccgatggagaaagattttcaaagatgttatagcatatattaaacactgaagaaaactgg
aactcatggaaaaatgaaggctgtcccaggtttgtgaaagaaaggtcatcagattccagg
ccggcaagagttctacggaaaagaagagccccggaggactttctagggaaaggacccaac
agaaaaattcacatgggaaatcgggagctaacaaggctttggcatctctgtcctgataat
atggaagcttgtaaatcagagacaagggagtacatgccaactttggaggaattttttgaa
gaagccattgaacaagcagaccctgaaaatatggttgaaagtgaatataaggctgtgaac
aattcaaattatggatggagagcactaagactattagcacggagaagccctcacttcttc
cagccaaccaacccgcagtttaaaagtttgccaggatatcttgaaaacgtggtaataaag
ctagccaaggaattaccacctccttctgaagaaataaaaacaggtgaggatgaagatgag
gaagatgaggatgctttacggaaggaaaatgaaagtcctggtgtccggcgagacaaacct
ggaactggggaacagatagagttctttgccaacaaactgggtgaacagcggaaggtgctg
gctcccttcttagaactgaaagactctgagatccggactgtcaccctgatcctggagctt
ctgaagttagctgtctgtctaggaattgctgttggtctccatttaaaaccccaggcatcc
cctggtgttttgaaaaaatggattcctgttctaaagtacctgtctcccagcgaattgact
gttatccagaggcaggggccaacgaagcttcctgtgaaacccgtgggtgccactggtgcc
ctactaacaatgccactgccccattttgcttctataactccaaagaagaagctgagtgtg
tctcaagatttcctgttaataagcgcatcgattgccatcctcaacctggggcgtctcaga
aaacctgtgaagctaaaggctgtttctggtgttctacaagtctcgccaatataccctggt
gtttttacccagcagatggtccatatggctacacttcaaatggccaagtttacaagaccg
ctaaaggatggaggtacatatttcttagggttttgggtgggcaattttactgcctag
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