Echinops telfairi (small Madagascar hedgehog): 101650767
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Entry
101650767 CDS
T08707
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etf04040
]
101650767 (SCN10A)
Ion channels [BR:
etf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101650767 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Na_trans_cytopl
GPHH
CcmD_alt
IQ
Motif
Other DBs
NCBI-GeneID:
101650767
NCBI-ProteinID:
XP_004708736
LinkDB
All DBs
Position
Unknown
AA seq
1960 aa
AA seq
DB search
MELPFKSLETTHFRRFTPESLVEIEKQIAAEQAARKARDKHREKDAEGKPRPQLDLRACN
QLPKFYGELPVELVGEPLEDLDSYYRTHRTFMVLNKRRTISRFSATRALWLFTPFHRIRR
TAIKVSVHSWFTFFITITILVNCACMTQTELPDKLEYVFTIIYTFEALIKILARGFCLNE
FTYLRDPWNWLDFGVITLAYIGEAIDFRGISGLRTFRVLRALKTVSVIPGLKVIVGALIH
SVKKLADVTILTIFFLSVFALMGLQLFKGNLKNKCVKNCMLLNQTANDSSEPREWDFCHK
DGDFLINKSGTFDPLLCGNGTDAGHCPEGYLCLKTAGNPDFNYTSFDSFSWAFLSLFRLM
TQDSWERLYQQTLRASGKIYMIFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATLDEIEA
KEKNFQETLELLRKEQEVLAAMGIDTASLHSHNESPLTSKSAGEKRPRMKPRVSEGSTDD
NKSLQSEPHNQRRMSFLGLASGRRRTSHGSIFHFRAPGRDFSFPEGVTDDGVFSGDGESH
RSSTLLGGSTGQKSPLPRSLLPQLSNSGSGHGEDGQYALPSNELTPGTTDVSAPNTGQKA
FLSAEYLNEPFRAQRAMSVVSIMTSVLEELGESKQRCPPCFTSLAEKYLIWKCSPTWGKL
KSVFFRIVTDPFAELTITLCIVVNTIFMALEHHGMSPWFESMLQIGNIVFTVFFTAEMVF
KIIAFDPYYYFQKWWNIFDCIIVTVSLVELGLAKKGSLSVLRTFRLLRVFKLAKSWPTLN
TLIKIIGNSVGALWNLTMILAIIVFVFALVGKQLLGEHYEKRYNISIAPQDGPRWHMYDF
FHSFLIVFRILCGEWIENMWVCMEVSQKSVCLILFLMVMVLGNLVVLNLFIALLLNSFSA
DNLTAPEDDGEVNNLQVALARIQAIGSRTKQAFCNFFRMPCLLPRPKPETQIVVKLPLSS
PKAENHIAADTAPMGSPAGSPAPRGPGEELSNFIANPSVWVSVPIAEGESDLDDLEDENE
EDARSSRQEEASTEEQLQQVDRCEDLTSKSPGSGTSSEDLAPYLGEKCEAQASPRDPAEA
MGDTSSSEGSTVDFPDPEEILRKIPELADDLEEPEDCFTEGCMRRCPCCRVDIAKAPWGV
GWQLRKTCYRIVEHSWFESFIIFMILLSSGALAFEDFYLEQKPTVKALLEYTDKVFTFIF
VFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILEYSEMAPIKALRTLRALRP
LRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINTTNGE
FTPVPYALINNKSECKQQNDTGNFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAV
DSREVDMQPKWEDNLYMYFYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTKQAFDITIMVLICLNMISMMIET
DDQSEEKTKVLNKINQFFVAVFTGECLMKMFALRQYYFTNGWNVFDFIVVVLSIASLVVS
TIVKSFESYFSPTLLRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYSIFGMANFPYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPF
CDPNLPNNNSSRGNCGSPAVGIIFFTTYLIISFLIVVNMYIAVILENFNVATEESTEPLS
EDDFDMFYETWERFDPEATQFITFSALSDFADTLSGPLRIPKPNRNTLIQMDLPLVPGDK
IHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIANTLRWKQEDISATV
IQKAYRCYMLHRAMIISDPSRVPRAEEEAVTPADEGFVAFLENDDGMLPDKSASTSATSF
PPSYDSVTRGLSDKAHLSTSNSMQKEDEAISQDEPALGPQ
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atggaactgccctttaagtctctggaaacgactcatttccgtcggttcactcccgagtca
ctggtggagattgagaagcaaattgcggccgagcaggcagccaggaaagcgagagataag
caccgggagaaggatgcagaagggaagcctcggccccagctagacttgagagcctgcaac
cagctgcccaagttctatggcgagctcccggtggagctggtaggggagccactggaggac
ctggactcctactaccgcacccaccggacatttatggtgctgaacaaaaggaggactatt
tcccggtttagtgccactagggccctgtggctcttcacgcctttccaccggatcagaaga
acggccatcaaagtgtccgtccactcatggttcactttttttattacaatcactattttg
gtcaactgtgcgtgcatgactcaaacggaacttccagataaactcgagtatgtcttcacc
atcatttacacgtttgaggccttgataaagatactggcgagaggattttgtctaaatgag
ttcacttacctgagagatccttggaactggctggacttcggtgttattaccctggcatac
attggcgaagcaatagactttcgaggaatctcaggcctgcggacattcagagttcttaga
gctttaaaaacagtttctgtgatcccagggctgaaggtcatcgtgggggccctgatccac
tccgtgaagaaactggcggatgtgacgatcctcaccatcttcttcctgagtgtctttgct
ctgatgggcctgcagctcttcaagggcaacctcaagaacaaatgtgtgaagaactgcatg
cttcttaatcagacagccaatgactcttcggagccccgcgagtgggatttctgccacaag
gacggagatttcctcatcaataagtcgggaacctttgatcccttactgtgtggcaatgga
acggatgccggccactgccctgagggctatctctgccttaaaacagctggcaacccggac
tttaactacacgagctttgattccttttcttgggccttcctctcactgttccgtctcatg
acacaggattcctgggaacgcctctaccaacagacgctgagggcttctgggaaaatctat
atgatcttttttgtccttgtcatcttcttgggatccttctacctggtcaacctgatcttg
gctgtggtcaccatggcctatgaagagcagaaccaggctaccctggatgaaatcgaagcc
aaggagaagaatttccaggagacccttgagctgctccggaaggaacaggaggtcctggca
gccatggggatcgacacggcctccctccactcccacaatgaatcacctttaacgtccaaa
agtgccggcgagaagaggcccaggatgaagccgagagtgtccgagggctctacggacgac
aacaaatcgctccagtctgagcctcacaaccagcgccgaatgtctttcttaggccttgcc
tctgggagacgccgcactagccatggaagtatcttccatttccgggctcctggccgagac
ttctccttccctgagggggtcaccgatgacggagtcttctccggagatggtgaaagtcat
cgaagttctacactgctgggtgggagcactggccagaaaagtcccctccctagaagcttg
ctgcctcagctctccaactctggctcaggacatggagaagatggacagtacgcattgccc
tctaatgagctcacccctggaaccacagatgtatcggcaccaaacacaggacagaaggct
ttcttgtcagccgaatacttgaatgaaccgttcagagcccagagggcaatgagtgtggtc
agcatcatgacctctgtccttgaggaactcggagagtccaagcagaggtgcccaccctgc
ttcaccagcttggctgagaaatacctgatctggaagtgcagccccacgtgggggaagctc
aagagtgtcttcttcaggatcgtcacggacccctttgccgagctcaccatcaccttgtgc
atcgtggtgaacaccatcttcatggctttggagcaccacggcatgagcccctggttcgaa
tccatgctgcagataggcaacattgtcttcaccgtgttcttcactgccgaaatggtcttc
aagatcattgcctttgacccctactattacttccagaagtggtggaatatcttcgactgc
atcatcgtcactgttagcctggtggagctgggcttagccaagaaggggagcctgtctgtg
ctgcggactttccgcctgctgcgggtcttcaagctggccaagtcctggccaaccttaaac
acgctcattaagatcatcggcaactcggtgggggcgctgtggaacctcaccatgatcctg
gccatcattgtctttgtcttcgcgctggttggcaagcaactcctcggggagcactacgag
aaacggtacaacatctctattgcccctcaggacgggccccgctggcacatgtacgacttc
ttccactctttcctcatcgtcttccgcatcctctgcggggagtggatcgagaacatgtgg
gtctgcatggaagtcagccagaagtccgtatgcctcatcctgttcttgatggtgatggtg
ctggggaacctggtggtgctcaacctgtttatcgccctgctgctcaactccttcagtgcg
gacaacctcacggccccagaggacgacggggaggtgaacaacctgcaagtggcgctggcc
cggatccaggccatcggcagtcgcaccaagcaggccttctgcaacttcttccgcatgccc
tgccttctcccccggcccaagcccgagacccagatcgtggtgaagctccccctgtcgagc
cccaaagctgagaaccacattgctgctgacactgcccccatggggagccctgccggctcc
ccagctcccagaggccccggggaggagctcagcaacttcatagccaaccccagtgtgtgg
gtctcggtccccattgccgagggtgaatctgacctcgatgatttggaagatgagaatgaa
gaggatgctcggagctcgagacaagaagaggcctccacggaggagcagctgcagcaagtg
gacaggtgtgaggacctgacatccaagagcccaggctcggggacgtcctctgaggacctg
gctccgtacctgggggagaagtgtgaagcccaggccagccccagggaccctgcagaggca
atgggagacaccagctcctccgagggcagcacggtggacttcccggatcctgaggagatt
ctgaggaagatccctgagctggcggatgacctggaagagccagaggactgcttcacagaa
ggctgcatgcgccgctgtccctgctgcagagtggacattgccaaggctccgtggggcgtc
ggctggcagctgcgaaagacctgctaccgcatcgtggagcacagctggttcgagagcttc
atcatcttcatgatcctgctcagtagtggagcgctggccttcgaagacttttacctggag
cagaagcccaccgtgaaggccctgctggagtacactgacaaggtgttcacgttcatcttc
gtgttcgagatgctgctcaagtgggtggcctacggcttcaagaagtacttcaccaacgcc
tggtgctggctcgacttcctcatcgtgaatatctcattgacaagcctcatagcaaagatc
ctggagtattctgaaatggcacccatcaaagcccttcggaccctccgtgccctgcggccg
ctgcgggctctgtctcgatttgaaggcatgcgggtggttgtagacgccttggtgggtgcc
atcccctccatcatgaacgtcctcctggtctgcctcatcttctggctcatcttcagcatc
atgggcgtgaacctctttgcgggcaagttttggagatgcatcaacaccaccaacggagag
tttactcctgtgccctatgctctgattaacaacaagtctgagtgtaagcagcaaaatgac
accggcaacttcttctgggtcaacgtgaaggtcaactttgataatgttgccatgggctac
cttgcccttcttcaggtggcaactttcaaaggctggatggacatcatgtatgcggctgtt
gattcccgagaggtggacatgcagcccaagtgggaagacaacttgtacatgtacttctac
ttcgtcatcttcatcatttttggcggcttcttcacactgaacctctttgttggagtcatc
atcgataacttcaatcaacaaaagaaaaagttagggggccaggacatcttcatgacggag
gagcagaagaagtactacaacgcgatgaagaagctgggctccaagaagccccagaagccc
atcccacggcccctgaacaaataccaaggcttcgtctttgacattgtgacaaaacaagct
tttgacatcaccatcatggtcctcatctgcctcaacatgatctccatgatgatagagact
gatgatcagagtgaagaaaagaccaaagtcctcaacaagatcaaccagttcttcgtggct
gtcttcacgggggagtgtctcatgaagatgttcgccctgagacaatactacttcaccaat
ggctggaatgtgtttgacttcattgtcgtggttctgtccattgcaagcctggtggtttct
acaatcgtcaagtcatttgaaagttacttctcgcccacgctcttacgagtcatccggctg
gcccgcatcggccgcatcctcaggctgatccgagcggccaaggggatccggacgctgctc
ttcgccctcatgatgtccctgccggcgctcttcaacatcggcctgctcctcttcctcgtc
atgttcatctactccatcttcggcatggccaacttcccctacgtcaagtgggaggcgggc
atcgacgacatgttcaacttccagaccttcgccaacagcatgctgtgcctcttccagatc
accacgtcggcgggctgggacggcctgctcagccccatcctcaacacagggccccccttc
tgcgaccccaacctgcccaacaacaacagctcccgggggaactgtgggagcccggcggtg
ggcatcatcttcttcaccacctacctcatcatctccttcctcatcgtggtcaacatgtac
atcgcagtgattctggagaacttcaatgtcgccacggaggagagcaccgagcccctgagc
gaggacgacttcgacatgttctacgagacctgggagaggtttgacccagaggccacccag
ttcattaccttttctgccctctctgattttgcagacaccctctcgggccctctacgaatc
cccaaacctaatcggaatacattaatccagatggatctgcccctggtccctggagacaag
atccactgtttggatatcctctttgccttcaccaagaatgtcctgggagaatctggggag
ctggattctctgaaggcgaatatggaagagaagtttatggcaacaaatctttcaaaggcg
tcctacgagccaatagcgaacaccctgcggtggaagcaagaagatatttcagctaccgtc
atccaaaaggcctatcgctgctacatgctccatcgtgctatgatcatctccgacccctcg
agggtgccgcgggctgaagaggaggctgtgacacccgcagacgaaggctttgttgccttc
ctggagaatgacgatggtatgctcccagacaaatctgcatctacatctgccacgtccttc
ccaccatcttacgacagtgtcactagaggcctgagtgacaaagcccacctgagcacatct
aactccatgcaaaaggaggatgaagccatcagtcaagacgaacctgccctggggccccag
tga
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integrated database retrieval system
