Echinops telfairi (small Madagascar hedgehog): 101651469
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Entry
101651469 CDS
T08707
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etf04121
]
101651469 (TRIM56)
Enzymes [BR:
etf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101651469 (TRIM56)
Ubiquitin system [BR:
etf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101651469 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
101651469
NCBI-ProteinID:
XP_004705666
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MVSQGSSTSLLEALSSDFLACKICLEQLQVPKTLPCLHTYCQACLAQLAEDGHLRCPECR
EVVPVPAGGVAVFKTNFFVNGLLDLVMARAGGDLRAGKPACALCPLMGGTSTGGPATARC
LDCADNLCQACADGHRCTRQTHAHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVQARRPDLEELLQGVDKSLGELEAARTTEKEM
LAQLREQAAGVGLQVEEAAERVLRALLSQKQEVLGQLRAHVEAAEEAARRRMVELEGREQ
VARTAATFARRVLSLGREAEILSLEGAMTQRLQQLQDWPWTPGPSPGLLPRLELHPQLLE
EGYPLLQLAFDQQQPQKGNGRDGAGAQGHDPTLIQGKDRAKAEKPGSGIQPQSQEVAKSP
KAERAQVLREERPQTPTVDRTWVPREAKEVKPQKSGSTNRRPMKGRLEPVSREHSPAPWP
TLEGRGLLPKPVFSCSFPTRMPGDKWSPRITGLCPFGTREILLADEQNKVLKRFSLNGDY
MGRVHIPEGCSPCSVAMLRDAVAFSSGARLYLIRSNGEVQWRRTLKHSQASHAVAALPGG
NKVAVSVSGYVEVYSMEGNLATRFVPGGKANKGLRALVFLATSPQGNFVGSDWQQNSLVV
CDGLGQVVSEYSGPGLQGCQPGSVSVDKKGFIFLTLREVNKVVVLDPKGSFLGDFLTAYH
GLEKPRVTTIVDGQHLVVSLSNGTIHVFRIRSPES
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagggatcctccacctccctgctggaggccttgagcagtgacttcctggcc
tgcaagatctgcctggagcagctgcaggtgcccaaaaccctgccctgcctgcacacctac
tgccaggcctgcctggcccagctggctgaagatggccacctgaggtgtcccgagtgccgg
gaggtcgtgcctgtgccagccgggggtgtggccgtcttcaagaccaacttcttcgtaaat
ggactgctggacttggtgatggcccgggccgggggagacctgcgtgcagggaagccagcc
tgtgccctgtgccccttgatggggggcaccagcaccggagggccagccactgcccggtgt
ctggactgtgccgacaacttgtgccaggcctgcgccgatgggcatcgctgcacccgccag
acccatgcccaccgagtggtggacctggtgggctaccgggccggctggtatgacgaggag
gcccgagagcgccaggcagcccagtgtccccagcaccccggggaggctctgcgcttcctg
tgccagccctgctctcagctgctgtgtcgagagtgccgcctggacccacacctggaccac
ccgtgcctgcccctggctgaggccgtgcaggcccggaggccggacctggaggagctgctc
cagggcgtggacaagagcctgggggagctggaggctgcccggacgacagagaaggagatg
ctggcccagctccgtgagcaggcggccggggtgggcctgcaggtggaggaggcagctgag
cgggtcctccgggcccttctgtcccagaagcaggaggtgcttgggcagctccgggcccac
gtggaagctgcggaggaggctgctcggaggaggatggtggagctggagggccgggagcag
gtggccaggacagcggccacattcgcccgtcgagtgctcagcctggggcgggaggccgag
atcctctccctggagggggcaatgacgcagcggctccagcagctgcaggactggccctgg
acccctgggccctcccctggcttgctgccccgactggagctccacccccagctgctggag
gaggggtaccccctgctccagctcgcctttgaccagcagcagccccagaagggcaacggg
agagacggagctggggcccagggccacgaccccaccctgatccagggcaaagacagagcc
aaagcagagaagccgggcagtggaatccagccacagagccaggaggtcgccaagtccccc
aaagctgagagagcccaggttctgcgagaagagaggccccagacacccacggtggacaga
acttgggtccccagagaagcgaaagaagtcaagccccagaaaagcggtagcaccaacagg
agacccatgaaaggcaggctggagcccgtttctcgggagcacagcccagccccctggccc
accctggaaggccgcggcctgcttcccaagcccgtcttctcctgcagtttccccacgcgc
atgcccggagacaagtggtctccccggatcacagggctctgtccctttggcacccgggag
atcctgctggccgatgagcagaacaaggtgctgaagcgtttctccctcaacggggactac
atgggcagggtgcacatccccgagggctgctcgccatgcagcgtggccatgctgcgggac
gcggtggccttctcatctggagcccgactctacctcatccgctcaaacggcgaggtacag
tggcgccggactctgaaacactcacaggccagccacgccgtggccgccctgccgggcggg
aacaaagtggctgtcagcgtgtccggctacgtggaggtttatagcatggaaggaaatctg
gccacccggtttgtccctgggggcaaggccaacaagggcctccgggcactggtgttcctg
gcaaccagcccccagggcaactttgtgggctccgactggcagcagaatagcctggtggtc
tgtgatgggctgggccaggtggtcagtgagtacagtgggcccggcctgcagggctgtcag
ccgggctccgtgtctgtagacaagaagggatttatctttctgactctccgggaggtcaac
aaagtcgtcgtgctggacccgaagggttcctttctgggggacttcctcacggcttaccac
ggcctggagaagccgagagtgaccaccattgtggacggccagcacctggtcgtgtccctg
agtaatgggaccatccatgtctttcggatccgctctcctgagagttaa
DBGET
integrated database retrieval system
