Echinops telfairi (small Madagascar hedgehog): 101658554
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Entry
101658554 CDS
T08707
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etf03009
]
101658554 (DDX21)
03036 Chromosome and associated proteins [BR:
etf03036
]
101658554 (DDX21)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101658554 (DDX21)
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
Pre-60S particles
Helicases
101658554 (DDX21)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101658554 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
101658554
NCBI-ProteinID:
XP_004701442
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MLELKKDFIFRKPPFLKANKEKLKSKKIEESVEVEETVSPKAKKVKKKAEPAEVEVNSPK
SKKVKKKEAQSQDDVTSPKTRSVKKKKEPTENPVVSPKTKKSIKNEEFSEEEEVEAPKPK
KMKKEKEMNGDIGEKRPQLKNGLGPSSNGKESASEESSSELEQEVPVEQKEGAFSNFPIS
EATIKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKIQGELQD
RKRGRAPQVLVLAPTRELANQVSRDFSDITRKLAVACFYGGTPYGGQLDRMRNGIDILVG
TPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLF
SATCPHWVFNVAKKYMKPTYEQVDLIGKKTQKTAITVEHLAIKCHWTHRAAVIGDVIRVY
SGYQGRTIIFCETKKEAQELSQNTSMKQDAQSLHGDIPQKQREITLKGFRNGDFGVLVAT
NVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQYKEEYQLVQVEQ
KAGIKFKRIGVPSATEIIKASSKDAIRYLDSVPPTAISHFKQSAEKLIEEKGAVEALAAA
LAHISGATAVDQRSMLNSDAGFVTMILKCSIEMSNISYAWKELKEQLGEEMDSKVKGMVF
LKGKLGVCFDVPTAAITEIQEKWHDSRRWQLSVATEQPELEGPREGYRGPRGPREGNRGF
RGQRDGSRGGFRGKRDGSRGGFRGQRSGGGGGGGGGNRNNRFQSTGQKRSFSKAFGR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgttagaattaaagaaggactttatcttccgaaagccaccatttttgaaagctaacaaa
gagaagctaaagtcaaagaagattgaagagtcagtagaagtggaggaaacagtttccccc
aaagctaaaaaagtgaaaaagaaagctgagcctgcagaagttgaagtgaattctcctaag
tctaaaaaggtgaaaaagaaagaggcacagtcccaagatgatgtgacttctcctaaaacc
agaagtgtgaagaagaaaaaggaacccactgaaaatccagttgtttctcccaaaacaaaa
aaatcaataaagaacgaggagttttctgaagaagaagaggtggaagcgcctaagcccaag
aagatgaagaaagaaaaggaaatgaatggagacatcggagagaaaagaccccagctgaag
aacggacttggaccctcctctaacggcaaggagtctgccagcgaagaaagcagcagtgag
ttagaacaggaagtaccagtagaacaaaaagaaggcgccttctctaattttcccatatct
gaagcgaccattaaactgctcaaagcccgtggggtgaacttcctgttccctatccaagcg
aagacatttcatcatgtctacagcgggaaggatttaattgcacaggcacgtacaggaact
gggaagactttctcctttgccatccccttgattgagaagattcagggagagctgcaagac
cggaagcgaggccgtgcccctcaggtgctggttcttgctccgacaagggagttggcaaat
caagtgagcagagacttcagcgacatcacaagaaagctggccgtggcctgtttctacggt
ggaactccctatggaggtcaattggaccgcatgcggaatgggattgacattctggtgggg
acgccgggtcgtatcaaagaccacctacagaatggcaagctagacctcaccaaactgaag
catgttgtcctggatgaagtggaccagatgttggatatgggttttgctgatcaagtggaa
gagattttatgtgtggcgtacaagaaagattcggaagacaatccccaaacattgcttttt
tcggcaacttgccctcattgggtatttaatgttgctaagaaatacatgaaacctacatat
gagcaggtggacctgattggtaaaaagactcagaaaacggcaataactgtggagcatctg
gctatcaagtgccactggacccaccgggcagcagtcattggggacgtgatccgggtgtac
agtggttaccaggggcgcaccatcatcttctgtgagaccaagaaggaggcccaggaactg
tcgcagaacacatccatgaagcaggatgcccagtcattgcacggagatattccacagaag
caaagggagatcaccttgaaaggttttcgaaatggtgattttggtgttttggtggcaacc
aatgttgctgcacgtgggttagatatccctgaggttgatctggtcatacaaagctctcca
ccaaaggatgtggagtcctacattcatcgttctgggcgcacgggcagagctgggaggaca
ggagtttgtatctgtttttatcagtacaaggaagaatatcagctggtacaagtggaacag
aaagcgggaattaaatttaaacgaataggtgtgccgtctgcaacagaaatcataaaagct
tccagcaaagatgccatcaggtatttggattcggtgcctcctaccgccatcagtcacttc
aagcagtcggctgagaaactgatagaggagaaaggcgctgtagaagccctggcagctgcc
ctggcccatatctcaggtgccacagcggtagaccagcgctccatgctcaactcggatgcg
ggctttgtgaccatgatcttgaagtgctcaattgaaatgtccaacatcagctatgcttgg
aaagagcttaaagagcagctgggtgaagaaatggattccaaggtgaagggcatggtcttc
ctcaaaggaaagctgggtgtttgctttgatgttcctactgcagccataactgaaatacag
gaaaaatggcatgactcacggcgctggcagctctccgtggccaccgagcaaccagagctg
gaaggaccgagggagggataccgaggccccagggggccaagggaaggcaatcgtggtttc
aggggacagcgggacggaagcagaggtggcttcagaggaaagcgggatggaagccgaggc
ggcttccgaggacagcggtctggaggaggtggaggtggaggcggaggcaaccgaaataac
agattccaaagcacaggccagaagcggagcttcagtaaagccttcgggcggtaa
DBGET
integrated database retrieval system
