Echinops telfairi (small Madagascar hedgehog): 101658924
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Entry
101658924 CDS
T08707
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101658924 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etf03041
]
101658924 (DDX46)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101658924 (DDX46)
Spliceosome [BR:
etf03041
]
Complex A
U2 snRNP components
U2 related factors
101658924 (DDX46)
Complex B
101658924 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
FAM176
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
101658924
NCBI-ProteinID:
XP_045141068
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKAESGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGTEVEDEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAF
TFITEDQARYAGDIIKALELSGTTVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINVQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgtcactatcggaagcggtcagcatcacgcggacgttctggaagc
cgatctagaagtcgttctccttcagacaaaagaagtaagcgtggagatgacaggcggtct
aggagcagagacagagaccgaaggagagagagatctcgtagcagggataaaagacgatct
cggtcaagagacaggaagcgtctgaggcgttccaggagcagagagagagagagaagccga
gaacgaaggagatctcgcagtcgagacaggagacgctcaagaagcagaagtcggggccgg
cgatccagatcctcgagtcctggcaataaaagcaagaaagctgaaaatagatctcggtcc
aaagaaaaagcagagagtggagaaagttctaaagagaagaagaaagacaaagacgacaag
gaggatgagaaagaaaaagatgctggcaactttgaccagaataagctggaagaagaaatg
aggaagcgaaaagagcgtgtggaaaaatggcgagaggagcaacgtaagaaagccatggaa
aacataggggaactgaaaaaggaaattgaagagatgaagcaagggaaaaagtggagcttg
gaagatgatgatgatgatgaagatgaccctgcggaggctgaaaaggagggcactgaggtg
gaggacgaggagctagacccactggatgcgtatatggaagaagtgaaagaggaagtcaaa
aagtttaacatgagaagtgtgaaaggtggtggggggaatgaaaagaagtctgggccaact
gtcacaaaagttgtcacggtcgtgactaccaaaaaagcggttgtcgatgccgataagaag
aaaggcgagctcatggagaatgaccaggacgccatggagtattcttcagaggaagaagaa
gttgatcttcagacagcccttacaggctatcagacaaaacagaggaagcttctagaacca
gtagaccatggaaaaattgaatatgaaccatttagaaaaaacttctatgttgaagttcca
gaactagcaaaaatgtctcaagaggaagtgaatgtatttcgattggaaatggagggcatt
acagtcaaggggaaaggctgccccaaaccaattaaatcttgggttcagtgtggaatttcc
atgaagatcttaaattctctcaaaaaacatggctatgaaaagcccacaccaatccagacc
caagcgattcctgccataatgtctggacgagacttgattggcatcgccaagacaggaagt
gggaagaccattgcttttctgttgcccatgttcagacacatcatggatcagaggtcgcta
gaagaaggagagggaccgatagctgtcatcatgactccaactcgggagctggctctgcag
attactaaagaatgtaagaagttctcgaagaccttgggactgagagtggtctgtgtgtat
ggaggaacaggaatcagcgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cgaagggtgacgtatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgtccgtcctgatcgacagacggttatgttttca
gctactttccccagagcgatggaggctctggctcgcagaatcctgagtaaacccattgaa
gtgcaggttggaggcaggagtgtggtttgctcagatgtggaacaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagttacttgagcttctaggccattatcaagaatccggg
tctgtcatcatatttgtggacaagcaggagcatgctgacggccttctgaaagatttaatg
agagcctcttatccttgtatgtctcttcatggaggtatagatcagtatgaccgagatagc
atcataaatgacttcaaaaatggcacctgcaaacttcttgtggccacctctgttgctgcc
cgaggtctggatgtgaaacatcttattctggtagtcaattacagctgccccaaccattat
gaagattatgtgcacagagctggacgaactggacgagcaggcaacaaaggctatgccttc
actttcatcacagaggaccaagctcgctatgctggcgacataataaaagccctcgagttg
tccgggacgacagtgcctcctgatctggagaagctctggagtgatttcaaagatcaacag
aaagctgaggggaaaatcattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagcgttggctaatgagaggaagaaattgcaaaaggcagctcttggc
ctgcaagattcagatgatgaggatgctgccgttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagcgagtgaaggacatggccgcccctggaacatcgagtgtccctgct
cccaccgcgggaaatgctgagaagttagaaattgctaagagattggctctaagaatcaat
gttcagaagaacttgggcatcgagtctcaggtagatgtgatgcagcaggccaccaatgca
atcctcagaggtggcaccattctggctcccactgtgtctgctaaaaccattgcagagcaa
cttgctgagaagatcaatgccaagctcaattatgtgcctttagagaaacaagaagaggag
agacaggatggtggacagaacgaatcttttaagagatacgaggaagaattggagatcaat
gacttcccccagactgccaggtggaaggtgacgtcgaaggaagcactgcagagaatcagc
gaatattccgaggctgccatcacaatcagagggacatacttccctcccgggaaggaaccc
aaggaaggggagcggaaaatttacttggcaattgaaagtgccaatgagctggctgtgcag
aaagcaaaggcagaaatcaccaggctcataaaagaagagctgatccgcctgcaaaattca
taccaaccaacaaataaaggaagatacaaagtcttataa
DBGET
integrated database retrieval system
