Empidonax traillii (willow flycatcher): 114056525
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Entry
114056525 CDS
T05887
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
etl01002
]
114056525 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114056525 (USP47)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114056525 (USP47)
Peptidases and inhibitors [BR:
etl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114056525 (USP47)
Ubiquitin system [BR:
etl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114056525 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
114056525
NCBI-ProteinID:
XP_027737584
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MDWRRGGAAALPAGADEEEEEEEEEEEEKEEEEEEEEEEKKKKKEEEEEDEPRASPRLPL
LLTTALGSACCGLRAAPAAMVPSEENQLVPKEAESAAEEPRVLCIIQDTTNSKTVNERVT
LNLPASTPVKRLFEDVASKVGYVNGSFDLMWGNGDNVTDTQTPIDQNSDKTILDAGFEPG
KKNFLHLTDKDGEQPHTMPEDTGTTDESAQERFIGPLPREGSVGCTNDYVSQSYSYSSVL
SKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPERSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGS
EKSSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQR
EIERNTCKIKLFCMHPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLECCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHV
VDLKTESVAPPISVRAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNISSKT
LKAEGFFRSNKVFIESSESLDRHVTYTDSHLWKLLDRHANTIRLYVSLPEQAPGSQFRRG
VFQKSSGGAGNLDEACERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKST
EASDFENIESPLNEIDSSASAENRELENQIHISDPENLQSEERSDSDVNNDRSTSSVDSD
ILSSSHSSDTLCNVDNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYD
ESGKSRGEAQYMYFKSEPYTADEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHF
KVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKF
LLDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHVYEEDI
NISSNWEVFLEILDGVEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLS
EISGIPLENIEFAKGRGTFPCDISILEIQQDLDWNPKVSTLNVWPLYICDDGAVIFYRDK
TEELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggattggcggcggggcggggccgcggcgctgcccgcgggagcggacgaggaggaggag
gaggaagaagaggaagaggaggagaaggaagaagaagaagaagaggaggaggaggagaag
aagaaaaagaaggaggaggaggaggaggatgagccgcgggcgtccccccgcctcccgctg
ctgctgacgacggcgctcggctcagcctgctgcgggctccgcgccgcgccagcggccatg
gtgccgagcgaggagaaccagctcgtccccaaggaggcagaaagtgctgctgaggagccc
agggtgctgtgtataatacaggataccacaaactccaagacagtgaacgagcgtgttacc
ttgaaccttccagcttccacgccagtgaaaaggctgtttgaagacgtggcttccaaagtg
ggctacgtgaatggatcctttgatttgatgtggggcaatggagacaacgtcactgacacg
cagaccccaatagatcagaacagtgacaaaactattctggatgctggttttgagccaggg
aagaagaacttcctgcatttgacagacaaagacggtgagcagcctcatacaatgccggag
gacacaggtacaacagatgagagtgcccaagagagatttataggccctcttccaagagaa
ggctctgttggatgtaccaatgactatgtcagtcaaagctattcttattcttcagtgctg
agcaaatcagagacaggttatgtggggctagtaaatcaagcaatgacttgctacttgaac
agccttctacaaacacttttcatgactcctgaatttagaaatgcattatataaatgggaa
tttgaagaatctgaagaggaccctgagaggagtatcccctaccagcttcaaagactgttt
gttttactgcagaccagcaaaaaaagggcgattgaaactacagatgttacgcggagtttt
ggatgggatagtagtgaagcatggcagcaacatgatgtacaggagctttgtagagtcatg
tttgatgctttggagcagaaatggaagcaaacagagcaggctgatcttataaatcaactg
taccaaggcaaactgaaggactatgtcaggtgtctagaatgtggctatgaaggctggaga
atcgacacttacctggatatcccgttggtcatccggccgtacggctccagccaggcgttt
gctagcgtggaggaagcactgcatgctttcattcagcctgagatccttgatggcccaaat
cagtacttctgtgaacgatgtaagaagaaatgtgatgccaggaagggtctgcggttcttg
cactttccgtatctgctgacgttgcagctgaagaggtttgacttcgattacaccaccatg
cacaggattaaactcaacgaccgcatgacttttcctgaggagttagacatgagcgtcttc
attgatgttgaagatgagaagtctccccagactgagagttgcactgatagtggagctgaa
aatgaaggcagttgtcacagtgatcagatgagcaatgatttttctaacgatgacggagtc
gatgaaggaatctgccttgaaagcaacagtgcagcagaaagaatttctaaagctgggagt
gaaaagagttctttactgtatgagctcttttctgtaatggttcattctggaagtgctgct
ggtggccattattatgcctgtataaaatcttttagtgatgaccagtggtacagctttaat
gatcagcatgttagcaagataactcaggaagatattaagaaaacatatggtggatcttct
ggaagcagaggctattattccagtgcttttgctagctccacaaatgcatacatgctgata
tatagactgaaggatccaacaagaaatgcaaagtttcttgaggcacatgagtatccagag
cacattaaacaattggtacagaaagagagagaattggaagaacaagaaaagaggcaacgg
gaaattgagcgcaacacttgcaagattaaattgttctgcatgcatcctacaaaacaaata
atgatggagaacaaattggaggttcataaggacaggacactgaaggaagctgtggaaata
gcttataagctgatggatttagaagaggctgttccattggaatgctgtcgtctcgtcaaa
tacgatgagtttcatgactacttggaacggtcttatgaaggagaagaggacacaccaatg
ggtttattgctgggaggtgtcaaatcaacgtacatgtttgacttactgctggaaacaaga
agacctgaccagattttccagtgctataaacctggtgaggtcatggtaaaggttcatgta
gtcgacctaaagactgaatctgttgctcctccaataagtgtacgagcttatttgaatcaa
acagtttcagaatttaaacaactcatttcaaaggccacgcacctgcccgctgaaacgatg
cgtgtggtgttggaacgctgctacaatgacctgcgtctcctgaacatttccagcaaaaca
ctgaaagctgaaggcttttttaggagcaacaaggtatttattgaaagctcagagtcttta
gatcgtcacgtgacatacacggattctcatttatggaagcttttggatcgtcatgcaaac
acaatcagactgtatgtttcattgccagagcaagcacccggatctcagtttagacgaggg
gtttttcagaagtctagtggaggtgcaggcaacttggatgaagcctgtgaaagagttaaa
ggacctgtaggtaatatgaaatctgtagaggcaattctggaagaaagcaccgaaaaactt
aaaagcttgtccctgcagcagcagcaggagggagataatggagacagcagcaaaagcaca
gaagccagtgactttgaaaacattgaatcacctttaaatgaaatagattcctcagcatca
gcagaaaacagagagcttgaaaaccaaattcatatttctgatccagaaaatctccagtcg
gaggaacggtcggattccgatgtaaataacgacaggagcacgagttcagtggacagtgac
atcctcagctccagtcacagcagtgacacgttatgcaatgtggacaatgccccgcttccc
ttggccaacggacttgattcccacagtatcacaagtagtaggcgatcaaaagcaaatcaa
gggaagaaggaaacctgggacactgcagaggaagattctggaacagacagtgagtacgat
gaaagtggcaagagcagaggagaagcacagtatatgtactttaagtcagaaccctacact
gcagatgaaggttcgggagaagggcaaaaatggctgatggtgcatgttgataaaagaatt
acactgtctgccttcaagcaacatttggagccttttgttggagttccatcttctcacttc
aaagtctttagagtctacgccagcaatcaggagtttgagagtgttcgactgaatgagacc
ctttcatcattttctgatgacaataagataactattagactcggaagagcccttaagaaa
ggtgaatacagagtcaaagtctaccaactcttggtgaatgagcctgagccatgcaagttt
cttctagatgcagtttttgctaaaggaatgactgtccgacagtccaaagaggagctgctt
cctcagcttcgagaacaatgtggcctagacttgacaattgacaggtttcgcctacgaaag
aaaacctggaagaatccgggcactgtgtttctggattatcatgtctatgaagaagatatc
aatatttcaagcaattgggaggtcttcttagaaatacttgatggagtagaaaagatgaaa
tccatgtcacaacttgctgttctgtcaagacgatggaggccatcagagatgaaactcgat
tctttccaggaagtagtactagaaagcagcagtgttgaagaactaaaagagaagctgagt
gaaataagtggaatacccttagaaaacattgaatttgcaaagggtagaggaacctttcca
tgtgacatttccatactagagattcagcaagacttggactggaatcctaaagtatctaca
ttaaatgtctggcctctgtacatttgtgatgatggtgcagtaatattttatagggataaa
actgaagaattaatggaattaacagatgagcaaagaaatgaactgatgaaaaaagaaagc
agcagactccagaaaactggacaccgggtaacctactctccccgtaaagaaaaggcacta
aaaatttatctggatggagcaccaaataaagatttgactcaagactga
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integrated database retrieval system
