Empidonax traillii (willow flycatcher): 114056591
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Entry
114056591 CDS
T05887
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etl03009
]
114056591 (DDX54)
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114056591 (DDX54)
Ribosome biogenesis [BR:
etl03009
]
Eukaryotic type
Pre-60S particles
Helicases
114056591 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
114056591
NCBI-ProteinID:
XP_027737703
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MAPPRSRRQPRGAPPCPQVPAPALPAFPTATEEDDGADAELDTQAMVRAQNQKKKKSGGF
QSMGLSYPVFKGIMKKGYKVPTPIQRKTIPPILRGRDVVAMARTGSGKTACFLIPMFERL
KAPSQAGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDI
IIATPGRLVHVAVEMKLKLHTVEYVVFDEADRLFEMGFAEQLQEIIARLPDCHQTVLFSA
TLPKLLVEFARAGLTEPMLIRLDVESKLSEQLKLAFFHVRGDDKPAVLLHLLRSVVKPQD
QTVVFVATKHHTEYLKELLTAQGIRCTHIYSSLDQTARKINIAKFSQGKCPVLLVTDVAA
RGLDIPMLDNVINFSFPAKAKLFLHRVGRVARAGRSGTAYSLVAPDEMPYVFDLHLFLGR
PLVLAGAQELPADAGGVLGRVPQSLVDDEECLLLTDHEGSLELRSLRRVADNAQKQYLRS
RPGPSPESIKRAKDLDVSQLGMHPLFSARFEDTELERLKFVDSIKTYKSKATIFEINATS
RTPASTVMRSKRRHDSALIEKFQRGQQEKRTAALKGQCHTTPGPQDEEGEGEQEDLQDVF
SNVAGQKRKRGRGGEDGPRKKPQQPAQQDKDFYIPYRPKDFESERGLSVGGEGSAFEQQA
AGAVLDLMGDENHNLNKSKQLLKWDRKKKRFVGQTGQEDKKKVRTESGRYISSSYKNNLY
EKWKQKYKVDERDEDDNGQHSREQFRGKHKRGHGPAQPPAQGRVRSELKNKQQILKQRKK
AAKQRFLQSGGLKRLKARNRQRVQELRQMAFGRRAGTTKKGKLRKRM
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgcgcagccgccgccagccccggggagcgccgccttgtccccaggtccct
gcacctgccctgcccgccttccccaccgccaccgaggaggatgatggcgccgatgccgag
ctggacacccaggccatggttcgggcccagaaccagaagaagaagaaatccggaggcttc
cagtcgatgggcctcagctaccccgtcttcaagggcatcatgaagaagggctacaaggtg
cccacccccatccagaggaagaccatcccccccatcctgcgcggccgggacgtggtggcg
atggcacggacgggcagcgggaagacggcctgcttcctcatccccatgttcgagcggctc
aaggcgcccagccaggccggggcgcgtgccctcatcctctcgcccacccgggagctggcc
ctgcagaccctcaagttcactaaggagctgggcaagttcacgggcttgaagacagccttg
atcctgggaggagacaagatggaggaccagtttgctgccctgcacgagaacccagacata
atcatcgccacccccgggcgcctggtgcacgtggcagtggagatgaagctgaagctgcac
actgtggagtacgtggtgttcgacgaggccgacaggctctttgagatgggctttgctgag
cagctccaggagatcattgcccggctcccagactgccaccagaccgtcctcttctctgcc
acactgcccaagctgctcgttgaatttgcccgggccggcctcaccgagcccatgttgatc
cgcctggatgtggagtccaagctgagcgagcagctcaagctggcgttcttccacgtgcgt
ggggacgacaaaccggccgtgctgctccacctgctccgcagtgtggtgaagccccaggac
cagactgttgtcttcgtggccaccaagcaccacacagagtatctgaaggagctgctgacg
gcacagggcatccgctgcacccacatctacagctctctggaccagaccgcccgcaagatc
aacatcgccaagttctcccagggcaagtgcccagtgctgctggtcacggacgtggccgcc
cgcgggctggacatccccatgctggacaacgtcatcaacttcagcttccccgccaaggcc
aagctgttcctgcatcgtgtcggtcgtgtggcccgagctggccggagtggcactgcctac
tcgctggtggctcctgacgagatgccctatgtcttcgacctgcacctcttcctggggcgc
ccgctcgtcctcgccggagcccaggagctgcccgctgatgctggtggggtcctgggccgt
gtcccccaaagcctggtagatgatgaggagtgcctgctgctgacagaccacgagggctct
ctggagctccgcagcctgcgccgtgtcgccgacaacgcccagaagcagtacctgcgctcc
cggcccggcccctcacccgagtccatcaagagagccaaggacctggatgtgtcccagctg
ggcatgcaccctctcttcagcgctcgcttcgaagacaccgagctggagaggctgaagttc
gtggacagcattaaaacctacaagtccaaggcgaccatcttcgagatcaacgccacgtcc
cggacaccggccagcaccgtcatgaggtccaagcggcgccacgacagcgccctgattgag
aagttccagcgtgggcagcaggagaagcgaacagcagcactcaaaggacagtgccacacc
acgcctgggccccaggatgaggaaggagaaggagaacaggaagacctccaggacgtgttc
tccaatgtggcgggccagaagcgaaaacggggccgagggggagaagatggtcccaggaaa
aagccacagcagccagcacagcaggacaaggacttctacatcccataccggcccaaggat
ttcgagagtgagcgggggctgagtgtgggcggtgagggcagcgccttcgagcagcaggcg
gctggggctgtcctggatctcatgggtgacgagaaccacaacctcaacaagagcaagcag
ctgcttaagtgggaccgcaagaagaagcggttcgtggggcagacaggccaggaggacaag
aaaaaggtgcggacggagagcgggcgctacatcagcagctcctacaagaacaacctctac
gagaagtggaagcagaagtacaaggttgacgagcgggatgaggatgacaacggccagcac
agcagggagcagttcagagggaagcacaagcgcgggcacgggcccgcgcagcccccggcc
caggggagggtgcgctcggagctgaagaacaagcagcagatcctgaagcagcgcaaaaag
gcggccaagcagcggttcctgcagagcgggggcctgaagcgcctcaaggccaggaaccgg
cagcgggtgcaggaactgcggcaaatggccttcgggcgccgggcaggcaccaccaagaag
ggcaagctgaggaagaggatgtag
DBGET
integrated database retrieval system
