Empidonax traillii (willow flycatcher): 114056675
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Entry
114056675 CDS
T05887
Symbol
PTPRM
Name
(RefSeq) receptor-type tyrosine-protein phosphatase mu isoform X1
KO
K05693
receptor-type tyrosine-protein phosphatase mu [EC:
3.1.3.48
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04514
Cell adhesion molecules
etl04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114056675 (PTPRM)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114056675 (PTPRM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etl01009
]
114056675 (PTPRM)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
114056675 (PTPRM)
Protein phosphatases and associated proteins [BR:
etl01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
114056675 (PTPRM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
MAM
fn3
ig
DSPc
Pur_ac_phosph_N
Ig_2
PTPlike_phytase
Ig_3
I-set
Y_phosphatase3
TM_ErbB1
Protocadherin
Motif
Other DBs
NCBI-GeneID:
114056675
NCBI-ProteinID:
XP_027737856
LinkDB
All DBs
Position
Unknown
AA seq
1498 aa
AA seq
DB search
MGKVGTCLVTLAGLLLAAGAQTFTGCCTFDEPLSSCGYSQSDDDDLNWDQVNAPIKPSSG
QGMPSGSFMLVNTSGRFAGQKAHLLMPHLKENDTHCIDFHYYVSSKSGSSPGTLNIYVKV
NDGPLGNPVWNTSVTGAWNRTELAISTFWPNFYQVVFEVVTSGHPGYVAIDEVKVLGHPC
TKTPHFLRLQSVEVNAGQFATFQCTANGGTDSSDRLWLQGIYVRDAPLKDIKVFNARRFV
ALFSVVNATKRDAGNYRCMIRTEGGVGVSNYAELIVKEPPVPIAPPQLSSVGATYLWIQL
NANSINGDGPIIQREVEYRTSSGSWYDIQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGG
TGSPGPALKTRTKCADPMRGPRKLEVVEIKSRQITICWEPFGYNVTRCHRYNLTVHYRYQ
AGGQEQVREEVSWDTESSHPQHTITNLSPYTNVSIKLVLMNPEGRKESQELVVQTDEDVP
SAVPLESIQGSTFEEKIFLQWREPVQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKL
GNETHYLFFGLYPGTTYSFTIRASTAKGFGPPITNQFTTKISAPSMPPYELETPLNQTDS
TVTVLLKPAQSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFA
AEFPANGLQAAQPFTIGDNKTYSGFWNTPLLPHKSYSIYFQAASRANGETKIDCVRVATK
AAIIVTQLTTPYIRIAPAAGDDQLTGAATRKPDPEPEKQSDHTVKIAGVIAGILLFVIIF
LGVVLVMKKRRSYHSYTYYLKLAKKRKETLSSTRQEMTVMVNSMDKSYTEQGTNCDEAFS
FMDTHNLNGRSVSSPSSFTMKTNTLSTTVPNSYYPDPFVPTAILVPINDETHTMVSDTSS
LVQSHTYKKRDPVDVPYQTGQLHPAIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAP
WDSAKKDENRMKNRYGNIIAYDHSRVRLQPIEGETSSDYINGNYIDGYHRPNHYIATQGP
MQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIETELLAE
YVIRTFAVEKRGAHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPNAGPLVVH
CSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEA
CLCGDTSIPASQVRSAYYEMNKLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIALLPRNH
EKNRCMDVLPPDRCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPNTVKDFWRL
VLDYHCTSIVMLNDVDPAQLCPQYWPENGVHRHGPIQVEFVSADLEEDIISRIFRIYNAA
RPQDGYRMVQQFQFLGWPMYRDTPVSKRSFLKLIRQVDKWQEEYNGGEGRTVVHCLNGGG
RSGTFCAISIVCEMLRHQRAVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALEYLNSG
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagttggaacttgcctggttactttggccggacttttgctggcagcgggagcg
cagacgttcacaggatgctgtactttcgatgagcccctcagttcctgtggctatagtcag
tcagatgatgatgatcttaactgggatcaggtgaacgcaccgataaagccatcctcgggt
caagggatgccatcaggttctttcatgttggttaatacatctgggagatttgcgggacag
aaagctcacctcctgatgccccatctgaaagaaaatgatacacattgcattgatttccac
tattatgtttcaagcaagagtggatctagccccggcactttgaatatatatgtgaaggtt
aatgatggtcctcttggtaacccggtctggaacacatctgtcactggtgcttggaacaga
acagaactggcaattagcactttctggcccaatttttatcaggttgtttttgaagtggtt
acttcaggtcacccaggatatgtggctattgatgaagtcaaagttttaggacatccatgt
acaaaaactccgcatttcttgcgtcttcagagtgtggaagtcaatgcaggacagtttgct
acttttcaatgcactgccaatggtggaacagactcaagtgacagactctggttacaggga
atttatgtaagggatgcacctttgaaggacataaaagtgttcaatgcgcgacgatttgta
gctctttttagtgtggtaaatgccacgaagagggacgccggcaactatcgctgcatgatt
cggacagaaggaggagttggtgtatcaaactatgcagagctgatagtcaaagagccaccc
gttcccattgctccacctcagctgtcctcagtcggtgcaacttacctgtggatacagttg
aatgccaattccatcaatggagatgggcccattattcaaagagaagttgagtatcgcact
tcaagtggaagctggtatgacatacaacctgtggactccacaagctataagattgggcac
ctggatcctgatacagaatatgaaatcagtgtattacttacaaggccaggtgaaggagga
acaggatctcctggcccagctctcaaaacaagaaccaaatgtgctgatccaatgcgagga
ccacgaaaactagaagttgtggagatcaaatctagacaaatcactatttgctgggaacca
tttggatataatgtcacacgttgccatcggtacaacctcacagtccattaccgttaccag
gcgggaggacaagagcaagtgagagaagaagtaagctgggatacagaaagttcacatccc
cagcacacaattaccaatctgtcaccgtacacaaatgtcagcatcaaattagtattaatg
aatcccgaaggacgaaaagaaagccaagaacttgtagtgcaaactgatgaagatgtcccg
agtgctgtaccacttgaatccattcaagggagtacctttgaagagaagatttttcttcag
tggagagaaccagtgcaaacatatggtgttattactttgtatgagatcacctacaaagca
gtgagttcctttgacccagaaatagatttatccaatcaaagtggacgagtctcaaagcta
ggaaatgaaacgcactatctcttttttggattgtatcctggcactacctactcttttacc
atcagagccagcactgctaaagggtttggacctccaataacaaatcagttcaccactaaa
atatcagcaccctctatgccaccatatgaacttgaaacacctttgaatcaaactgacagc
actgtgacagtcttgctgaaacctgcacagagcagaggcgctcctgtcagtgtctatcaa
atagttgttgaagaagaacgcccacggaggaccaaaaagacaactgaaatcctgaaatgc
tacccagtgcccattcatttccagaatgcctcgctcttgaattcccagtactactttgct
gcagagtttccagccaatggtttacaagctgctcaaccttttactattggtgataacaaa
acctacagtggtttctggaacactcctcttcttcctcataagagctacagcatctatttt
caagctgctagcagagccaatggggaaaccaaaatcgactgcgtcagggtagccacaaaa
gctgcgataatcgtgactcagcttacaacaccatacattcgcatcgcccctgctgcaggc
gacgaccaactaacaggggctgccactcgaaaaccggacccagagcctgagaaacagagc
gaccatactgttaaaattgctggagtcattgcaggcatcttgctgttcgtcattatattt
ctgggggtcgtgctggtaatgaagaaaagaagaagctatcactcctacacttattaccta
aaattggctaaaaagcggaaagagacactgagtagtacacggcaggaaatgacagtgatg
gtgaattcaatggataaaagctacactgagcaaggcaccaactgtgacgaagctttctct
ttcatggacacgcacaatctaaatgggagatctgtatcttcaccatcttcatttacaatg
aaaactaacacactgagcacaacagtgcctaattcttactatccagatccatttgtgcca
actgcaattttagtgccaatcaatgacgaaacccatacgatggtcagtgacacaagcagc
ctggtccaatcccatacctacaagaagcgagatccagtggatgtgccctaccagaccgga
cagctccatccagccatccgtgtagctgacttgctacagcacatcacccagatgaagtgt
gcagaaggctacggatttaaagaggaatatgaaagtttctttgaaggacagtccgcaccg
tgggattcggctaagaaagatgagaacagaatgaaaaatagatatgggaatatcattgca
tatgatcattctcgagtgagattgcagcctattgaaggagaaacaagttccgattacatc
aatggaaattatattgatggttatcatagaccaaatcactacatcgctacacaaggacca
atgcaggagacaatatatgacttctggagaatggtatggcatgaaaacacagccagcata
atcatggttactaatctcgtagaagtgggaagggtcaaatgctgcaagtactggccagat
gacacagagatatataaagacattaaagttaccttaatagaaacagagctcctggctgaa
tatgtgattcgaacatttgctgtagaaaagagaggtgcccatgagattcgagaaatacgt
cagtttcacttcacgggctggccagaccacggtgtaccctaccatgcgacgggcctgctg
ggatttgtacggcaggtcaaatccaagagcccaccaaatgctggccctctggttgttcac
tgcagtgctggtgctggcagaactggatgcttcattgttattgacatcatgctagatatg
gcagaaagagaaggtgttgtagacatatacaattgcgtgagagagcttcgatcccggaga
gttaacatggtgcagacagaggaacagtatgtattcatccatgatgctatcctggaggcc
tgcctttgtggggacacatctattccagcttctcaagttaggtctgcttactatgaaatg
aataaactggatcctcaaactaactccagccaaatcaaagaggagtttaggactttaaat
atggtgactccgacactgcgtgtagaagactgcagcatagcgcttctaccacgaaatcat
gaaaagaatcgttgtatggatgttctccctccagacagatgcctgcctttcctcataacg
atagatggggagagcagtaactacatcaatgctgcactgatggatagctacaagcaacca
tcggcttttatagttacacagcatcctttaccaaataccgtcaaagatttctggagactg
gtcctagattatcactgcacttcaatagttatgctgaatgatgtagatcctgcacaacta
tgtcctcagtactggccagaaaatggagtacaccggcatggtcctattcaggtggagttt
gtatcagctgatttagaagaagacataatcagccggatattccgaatttataatgcagcc
cgaccccaagatggctatcggatggtgcagcagttccagttcctgggatggcccatgtac
agagacactccggtttctaagcgctccttcttgaaactcatccgtcaagtggataagtgg
caggaagaatacaatgggggagagggacgcacagttgtacattgcttgaatggaggtggc
cgcagtgggactttttgtgcaatcagtattgtttgtgaaatgcttcgacatcagagggct
gttgacgtattccatgctgtgaaaacactgaggaataataagcctaacatggtggacctt
ctggatcaatacaaattctgctatgaagtggctttggaatacttgaattctggctga
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integrated database retrieval system
