Empidonax traillii (willow flycatcher): 114056830
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Entry
114056830 CDS
T05887
Symbol
THBS4
Name
(RefSeq) thrombospondin-4 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04145
Phagosome
etl04510
Focal adhesion
etl04512
ECM-receptor interaction
etl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114056830 (THBS4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114056830 (THBS4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
114056830 (THBS4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114056830 (THBS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114056830 (THBS4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
etl04147
]
114056830 (THBS4)
00536 Glycosaminoglycan binding proteins [BR:
etl00536
]
114056830 (THBS4)
Membrane trafficking [BR:
etl04131
]
Endocytosis
Phagocytosis
Opsonins
114056830 (THBS4)
Exosome [BR:
etl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114056830 (THBS4)
Exosomal proteins of colorectal cancer cells
114056830 (THBS4)
Exosomal proteins of bladder cancer cells
114056830 (THBS4)
Glycosaminoglycan binding proteins [BR:
etl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114056830 (THBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
114056830
NCBI-ProteinID:
XP_027738188
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MGCERGAALLLLPLVLQLCPGRAAAPAPRVFDLLPYSNKRVVPNFLQQAFGDPTLNEMYL
LSTFKLQPKSTATVFGLYSSADNGKHFEFTVMGRMNKVVLRYLKSDGRLNSVIFSNIQLA
DGKPHAVILWLSGLQQGLSTIELYLDCLQVGAIEDLPKPFSALSQKLVVVELRIFQEKPQ
DTLDELKLVTGGTLAEVGNLQDCFLQQIEPVPQYTGDYSRQLMGQMMQMNQILADVKDLL
RQQVKETTFLRNTIAECQACGLGTVSFPTQLPRRPKPKCEVNSCFRGVRCVETAEGFQCG
PCPEGLTGNGVTCSDIDECRYNPCFPGVRCVNTAPGFRCETCPPGYTGQTMQGIGISYAK
SNKQVCLDIDECQNGGLGVCVPNSHCINTLGSYHCGQCKPGYTGDQTRGCQAERSCRNRA
LNPCSIHARCIEERRGEVTCICGVGWAGDGYICGKDVDIDGYPNEELACTAENCRKDNCR
FVPNSGQEDADSDGIGDACDDDADGDGIPNEQDNCVLAPNVNQRNSDQDIFGDACDNCRN
VLNNDQRDTDGDGKGDACDDDMDGDGIKNLLDNCQRIPNEDQEDTDNDGVGDACDSCPTV
SNPNQSDIDNDLVGDSCDTNQDSDGDGHQDSTDNCPTIINSSQLDTDKDGLGDECDEDDD
NDGIPDLLPPGPDNCRLVPNPGQEDDNGDGVGDVCESDFDQDTVIDRIDVCPENAEITLT
DFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVN
TVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEH
LRNSLWHTGDTSDQVRLLWKDPRNVGWKDKVSYRWFLQHRPQIGYIRARFYEGSDLVADS
GVTIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQAQQFGVGDI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcgagcgcggcgccgcgctgctgctcctgccgctcgtcctccagctctgcccg
ggccgcgccgccgcgcccgccccgcgagtttttgatcttcttccatattccaacaaaaga
gtggtgccaaacttcttgcaacaagcatttggggatcctacgctgaatgaaatgtacttg
ctttcaaccttcaaactgcagccaaagagcacagccactgtttttggcctgtattcatca
gctgacaacggcaaacattttgaatttacggtaatgggacggatgaataaagtggtgctg
cgctatctgaagagtgatggaaggttgaattctgtgatttttagcaacatccagctggct
gatgggaagccccatgctgtcatcttgtggctgagtggtctgcagcagggattgagcaca
atagagttgtatctggactgcctgcaagtaggtgccattgaggacctgccaaaaccattt
tcagcactgtctcagaagctggtggtagttgagttgcgtattttccaggagaaaccgcag
gatacactagatgagctgaagctggtaactggaggaacccttgccgaagtggggaacctg
caggattgttttcttcaacaaattgagcctgtacctcagtacactggtgattatagtagg
cagctgatgggtcagatgatgcagatgaaccaaatactggcagatgtgaaagacctcctc
agacaacaggtcaaagaaacaacttttctgagaaataccatagctgagtgccaagcgtgt
ggtttgggaactgtgagttttccaactcagcttcctaggcgccctaaacccaaatgtgaa
gttaactcctgcttcaggggagtgagatgtgtggagacagcagaaggatttcagtgtggg
ccctgccctgaaggactcacaggaaatggagttacatgctcagatattgatgagtgtcgt
tacaacccttgcttccctggagtgcgatgtgtgaacactgctccaggtttccgatgtgag
acctgtcctccaggatatacaggacaaaccatgcaagggataggaatcagctatgccaag
agcaataagcaggtctgcttagacattgatgaatgtcagaatggtggacttggagtctgt
gttccaaattctcattgcataaacactttggggtcttaccactgtgggcaatgcaaacca
ggatatacaggagaccaaaccaggggatgccaggctgaacggagctgcagaaatcgagcc
ctcaatccatgcagcatccatgcccgttgtattgaggagaggcgaggagaggtgacatgt
atttgtggcgttggctgggctggtgatggttatatttgtggaaaagatgttgacattgac
ggctaccctaatgaagaactcgcatgcactgctgaaaactgcagaaaggacaattgccga
tttgtcccaaactctggacaagaagatgctgacagtgatggaattggagatgcctgtgac
gatgatgcagatggagatggcattcccaacgagcaggataactgtgtcttggctcccaat
gttaatcagagaaacagtgaccaagatatctttggagatgcttgtgacaactgccgcaat
gtcctgaataatgaccagagggacacagatggtgatgggaaaggagatgcttgtgatgat
gacatggatggagatggtattaagaaccttttggataattgtcagaggatccccaatgaa
gaccaggaggacacagataatgatggtgttggtgatgcttgtgacagctgccctacagtc
agcaacccaaatcagtcagatattgacaatgacctggttggagattcctgtgataccaat
caggacagtgacggtgatgggcaccaggacagcacagacaattgccctaccattattaac
agctcccagctggacacagataaggatgggttgggtgatgagtgtgatgaagatgatgac
aacgatggtattcctgaccttctgcctcccggccctgacaactgcaggctggttcccaac
ccagggcaggaagatgataatggtgatggagttggagatgtctgcgagtctgattttgac
caggatacagtgattgatcggatcgatgtgtgccctgagaatgcagagatcaccttgaca
gacttcagggcctatcagaccgtggtgttagacccagagggggatgcacagattgatccc
aactgggtggttctgaaccagggcatggaaattgtgcagactatgaacagtgatcctggc
cttgctgttggttacacagcttttaatggtgttgactttgagggcactttccacgtaaac
acggtgacagatgatgactatgctggctttatcttcggttatcaagacagctctagcttt
tatgtggtgatgtggaaacagacagagcagacctactggcaggcgactcccttcagagct
gttgcagagcccggcattcagttaaaggctgtgaaatccaagacaggtcctggtgagcac
ctccgcaactccctgtggcacacgggggacaccagtgatcaggtcaggctgctgtggaag
gatccccgaaatgtagggtggaaagacaaagtctcctatcgctggttcttgcagcataga
ccccagattggttatatcagggcaagattttatgaaggctctgaccttgtggcagactct
ggtgtaactatagacaccacaatgcgtggaggacggcttggagttttctgcttctctcag
gaaaacattatttggtctaacctgaaatatcgctgcaatgacaccatcccagaggacttc
caagaatttcaagcgcagcaatttggtgttggggatatttaa
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integrated database retrieval system
