Empidonax traillii (willow flycatcher): 114057445
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Entry
114057445 CDS
T05887
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114057445 (FREM1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
114057445
NCBI-ProteinID:
XP_027739549
LinkDB
All DBs
Position
Unknown
AA seq
2178 aa
AA seq
DB search
MKFFEKSWWFLLLPIVLRVVCSSFISVNHGVKVMKGQSVFLSEDDLKFSIPREKDVCKVE
VVINEPITQRVGQLTPQVFDCHFLPNEVKYTHNGCPILDEDMVMLRLYRFTEVETFVETF
TLHVQLLEPDCNIIKMRSHALEVPEYYGLSRVIDKNILTFDYDRKINLDCTISIISSETH
LPAHGQLTTTKVQQEQIHGDQPRSSFPGTKHSLGQQCRNGSCMQGLGVLHNKKMSCEEFL
RMGIRYQHLDPPSPDTDYIPVRLDLTDSRSKTLHKTEYAWLPVHIKGAVPNQIPKAAPMA
KFILEVDQFILTPISTTTIDAEDNETPKSLLVFNITKPPPQGFITHLSDHTKPVGSFTWK
DLSDMLIAYQPPNNSHTERRNYEVEFEAHDFYFERSLPITVYLSIRTTDTNAPRVSWNTG
LNLLEGQSRPITWQHFQIVDNDDIQNVHLVTVDGLQHGWLSVRGGKGFMFTVSDIQAGVV
HYHHDDSDSTKDFVVFRIFDGPHSIRHKLPINILPKDDSPPFLISNMVIEVHEGQTILIQ
SSMLHASDMDSSDDYILFNITKPSQAGEIMKKPGPNMIGYSVNSFLQRDLFNGIIYYHHL
GGEVFEDSLEFVLCDSHDPPNLSDPQVMMVHVIPVDDQLPREAPDVTRHLVVKETEIAHL
TKKHLHFIDVEERDRELTYTITTSPYFSCTQGYTDAGKLFMVDTIPKLVKDPAAIALRSF
TQHAVNYMKVAYMPPLQDIGPEPKQVQFIFSVSNHHGGTLYGICFNITILPVDNQAPEVS
TSHLRVEEGGLAPITEGHILISDADTKQEHLLLLLQRQPQHGVVELDGIPMKEGNRLSCE
DLRTLAVRYRHDGSETLTDDVLFAATDGIQFVEFILQVKVLPVNDELPVMRTGLVPLLHC
LEGEEVVISSEYLYATDADSDDMKLTFMLPRQPYHGVVRKAGIAVDHFSQADVIAGLVTY
KHTSGEIGLTPSIEILTFIVSDGEAGLDVKDCCYDGPPPPPVSPHDLFPVYDLNITVLPV
DNQPPSIATGASFVVEEGSSAALTTNHLFATDPDTIADDLEFVLVSPPQFGYIENILPSP
GFEKSNIGVSIASFQLKHLKAMNINYVQARHMRMEPTEDKFVLYVTDGLHRSAETPFFVL
ITPTNDEVPEFIARNITVQEGEMKELDLSVINAVDLDVPQDHLVFGVVQRPWYGFLINGI
HGNDILHYKQLINHNHHNHGLLVHDFSMELLKNGMKLMYMHDNSENLTDSFKIQLSDGKH
KVLRTISVKVIPVNDEKPLLRKKNDIEVNIGETRIISSAVLSAEDKDTPRERIYYLFERL
PENGQLQLKVGQGWVTLQTGMTCTQEELDMNLVRYVHTGAVGSKNQDSFTFYLWDGYNRS
PAVDFYINIKDMEKGDIAVFMKLLRVPKGDHSCITTDVLLALDGTDKPEELLYVITSPPQ
YGQIEYITSPGTPITNFSQMDIARQIVCYVHNTKAAVLEDTFRFTISNGLRTKHGTFMIS
LEAVDQALPTLSRNTGLRTMEGAMALLSPDVLQLSDPDTAKENLTFLLVQLPQYGHLCYR
GAVLLQYNFTQQDVDNRDVAYKHRGGDSQMDRFTFVASDRTNQGFIVNGRVQTEPVAFTI
QVDHLDKTAPKIIHLHCFSDVELLKNGNYGIYITARSLKASDPNTEDDKIIFKILQGPHY
GYLVNITTGGLIQEGFSQKDLNNKIILYVINSSQEVNSDNLEFQVTDARGNSAGPQRLEL
KWSRIEMQQTEYEVCESIGMVSLKITRAGHSVESAFITVKVNEISATLGKDFTVTPSKLV
QFDPGMSTKTWNIAITCDGLEEDDEVFEVVLNSPVNAVLGTRTRAVVKILDSKGGQCSYS
HSSSQSKHGFWGRGTMFPVSKGSSSPSRPGNFSLEGIPLPPSKGMREHGRDSWLEHSLAN
LSRTRLRVTGNGQIVRPSSVFRNGTDVVFKYHGMVSLKIEDDTSSAKTNKKAKPQVNVIS
SRKIEIPQADKAELASEPSSRHKDFYPFPKACTPDLKGLLHYEESTQKLFQCDGITWKFW
NSQSKEVSRKKCPSGWSYHEGSCYFLVVNHKVTWNTAAQACREQYLGSLASVANEQHMQW
LWDFGRRMPFWIGLNDQLNPGHWEWNGGEPVTYINWRRGSYRFPVGGRNCVFVQKRGKWQ
ATDCKNVKPNSYICSRKL
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctttgagaaaagctggtggtttctgctgctgcctatagtgctaagagtggtg
tgctcctcctttatcagtgtgaaccatggggtgaaagtgatgaagggacagtctgtcttc
ctgtcagaagatgacctcaagttttccatccccagagagaaggatgtctgcaaagttgaa
gttgtgattaatgagccaataacacagagagttggacaactaactccacaggtttttgac
tgtcacttccttcctaacgaagtcaaatatacccacaatggctgtccgattttagacgaa
gacatggtcatgcttaggttgtacaggtttacggaagtggaaacatttgtagaaacattc
acccttcacgtgcagttacttgagccagactgcaacatcataaaaatgcgctcccatgcc
ctggaggtccctgaatactatggtctgtccagggtgattgacaagaacatcctcactttt
gattatgacaggaagataaatctggattgcaccatttccataatctcttcagaaacccac
ctgcctgcacatggccagctcaccaccaccaaagtgcagcaagagcagattcatggagat
cagccacgaagctcattccctggcactaagcacagcctgggccagcagtgcagaaatggg
agctgcatgcaggggttaggagtccttcacaacaaaaaaatgagctgtgaagaatttctg
aggatggggattcggtatcaacatcttgaccctccctcacctgacactgattatattcct
gtgaggttggatctcacagacagcagaagcaaaactctgcacaagactgagtatgcatgg
ctccctgttcacattaaaggtgctgttcccaaccaaatacccaaagctgccccaatggca
aagttcatcctggaagttgatcaatttattttaacccctatttcaaccacaaccattgat
gctgaagacaatgaaactccaaagtccctgcttgtattcaacattaccaagccacctcct
cagggcttcatcactcacctgtctgaccacacaaaacctgttggctccttcacctggaaa
gatctcagtgacatgctcattgcttatcagcctccaaataacagccacacagagaggagg
aattatgaggtggagtttgaggctcatgacttctactttgaaaggagtttgccaatcact
gtctatctttctatcagaacaacagatacaaacgcccctcgggtttcatggaatacaggc
ctcaacctcctagaggggcaatcccgacccatcacatggcaacacttccaaattgtagac
aatgatgacatccaaaatgttcacttggtcacagtcgatggcttacagcatgggtggctc
tcagtgagaggagggaaaggattcatgttcacagtctctgacattcaggctggagttgtt
cactaccatcatgatgacagtgattctactaaggactttgtggtatttagaatttttgat
ggcccccacagtattcgccataaactgccaatcaatattctccctaaagatgacagccct
ccatttctgatcagcaatatggttattgaagttcatgagggacagaccatcctgattcag
agctccatgcttcatgcttctgacatggattccagtgatgattacatactattcaatatt
accaagccatcgcaggctggagaaatcatgaagaaaccaggaccaaacatgatagggtat
tctgtcaacagttttcttcagagggatctatttaatggaataatttattatcatcatttg
ggaggagaagtatttgaagattcccttgagtttgtgctgtgtgacagccacgatcctccc
aatctctcagatccacaggtgatgatggtgcacgttattcctgtggatgatcagctcccc
agagaagccccagatgtgacccgtcacctggttgttaaggagacagagattgctcaccta
actaagaaacatctccacttcatagatgtggaagagcgagacagggagctcacatacacc
ataactacttccccatatttctcttgcactcagggctacacagatgctgggaagctcttt
atggtggacaccatccccaaattggtcaaggatcctgctgctattgcactgcggtcattt
actcagcatgctgtgaactatatgaaagttgcctatatgccaccgctgcaggacattggt
cctgaacctaagcaagtccagtttattttttctgtcagcaatcatcatggaggcactttg
tatgggatctgcttcaatattactattcttcctgtggacaatcaagctccagaggtttcg
acaagccatctgagagtggaagagggtggcctggcccccattacagagggacacattctc
atctctgatgcagatacgaaacaggagcatctcctcctgctcctgcagaggcagcctcag
catggtgtggtggagctggatggcattcccatgaaggaaggcaacaggctttcctgtgag
gacctgcgtaccctggcagtcagatatcgtcatgatggctctgagactctcactgatgat
gttctctttgcagccacagatggcatccagttcgtagagttcatcctgcaggtcaaggtg
ctgcctgtgaatgatgagctacctgttatgcgaacaggcctcgttcctctgctccactgc
ctggagggtgaagaagtggtcatctcctcagagtacctttatgccacagatgcagacagt
gatgacatgaaactgacatttatgctgcctcgccagccctaccacggggtggtgaggaaa
gctggtattgctgtggatcatttctcccaagctgatgtcatcgctggtttagtcacgtac
aagcacactagtggggagattggcctgactccttccattgagatcttaaccttcattgtc
tctgatggtgaggctggcctagatgtgaaagactgctgttatgatggacctcctcctcct
ccagtttcacctcatgatctatttcctgtgtatgaccttaacatcactgtacttccagtg
gacaaccagcctccatctattgcaactggtgcaagttttgtggtggaggagggctcctcg
gcagcccttacaaccaaccacttgtttgccactgaccctgacaccattgcagatgattta
gagtttgtgttggtttctcctccccagtttggttacattgaaaatatactgccttctcct
gggtttgagaagagcaacatcggagtaagtatagcttcctttcagctaaagcacctgaaa
gccatgaatataaactatgtacaagccaggcacatgagaatggagccaacagaggacaag
tttgtactttatgtcactgatgggttgcatcgctcagcagagactccgttttttgtgctg
atcaccccaaccaatgatgaagtcccagaattcatagccaggaatattacagttcaagaa
ggggagatgaaagagctggatctgtctgttatcaatgcggttgacctggatgtacctcaa
gaccatttggtatttggggttgtgcagaggccctggtacgggttccttattaatggaatt
catggcaatgatattctacactataaacagttaattaaccacaatcaccacaaccatggg
ttgcttgttcatgacttttccatggagctactgaagaatggaatgaagctgatgtacatg
catgacaattctgaaaacctcactgacagctttaaaatccagctatcagatggaaaacat
aaagttctcagaaccatttcagtaaaggtcattccagttaatgatgagaaaccactgctg
cgcaagaagaatgatatagaggtgaatataggtgaaactcgaataatttctagtgctgtt
ctgtcagcggaagataaagatacccccagggagagaatttactacttatttgaaagactt
ccagaaaatggtcagcttcagctcaaggtaggacaaggctgggtgactctccaaactgga
atgacgtgtactcaggaagagctggatatgaaccttgtgagatatgtccatacaggagct
gtagggtccaagaaccaagacagcttcacattttacctctgggatgggtacaacagatcc
ccagctgttgacttttacataaatatcaaggacatggaaaagggagacatcgccgttttt
atgaaactcctcagagtgccaaaaggagatcacagctgcattacaaccgatgtcctcctt
gcactggatgggactgacaagccagaggagctcctttacgtgataacctccccaccccag
tatggacaaatagagtatatcacctctcctggcacccctattacaaatttcagtcaaatg
gatatagcacgacagattgtctgctatgttcacaacacgaaggcagctgttcttgaagat
acattcagattcacgatcagcaatggactgaggactaagcatgggacattcatgatctcg
ttggaggcagttgaccaagctttgcccacactatctaggaacacggggttaagaacaatg
gaaggtgctatggcacttctctctcctgatgtcctgcagctttcagacccagacactgcc
aaagaaaaccttaccttcctcttggttcagctcccccaatatggtcacctctgttatcgt
ggagctgtgctactgcagtacaatttcacacagcaagacgtggacaacagggatgttgca
tacaagcaccgaggtggggattcccagatggacagatttacatttgttgcctcagatagg
actaatcaaggtttcatcgtgaatgggagagtgcagaccgagccagtggcattcaccatt
caggtggatcatctggacaaaacggcaccaaaaattattcatctccattgcttttctgat
gtggaactgctgaagaatggcaattatgggatctatattactgccaggtccctgaaggca
tctgaccccaatacagaagatgacaaaataatttttaagattttgcaaggtcctcattat
ggctacctggtaaatataacaacaggtggactcattcaggaagggtttagccaaaaggat
ttaaacaacaaaatcatactttatgtcatcaactcatcacaggaagtgaattcagacaac
ttggagtttcaagtcacagatgccagagggaactctgcagggccccaaagattggagcta
aagtggtctcggattgaaatgcaacagactgaatatgaagtgtgtgagagcataggaatg
gtgtctctgaaaatcaccagggcaggacactcagtagagtctgcctttataactgtgaag
gtcaatgaaatatctgctacactgggaaaggactttacagtaactccctccaagcttgtt
cagtttgatccaggaatgtcaaccaagacatggaatatagcaattacctgtgacggatta
gaggaagatgatgaagtctttgaagtagttctgaactcccctgtgaatgctgttcttggc
acacggacaagagctgtagtgaaaattttggactcaaaaggaggtcagtgcagctattcc
cattcttctagccaaagcaagcatggcttctgggggagaggaacaatgtttccagtttcc
aaaggctcctcatcaccttccaggcctggcaatttttccctggaagggatcccactgcct
ccttccaaagggatgagagagcatggaagagactcgtggctggagcacagcttggcaaat
ctgtcaaggaccaggctgagagtgactggaaacggccaaatagttcgcccttcatctgta
tttagaaatggaacagatgtggttttcaaatatcatgggatggtatcactcaaaatagag
gatgacacctcatcagctaaaaccaacaagaaggcaaaaccacaagtaaatgtcatctcc
tctaggaagatagaaatcccacaggctgataaggcagaacttgcatctgaaccaagttca
agacataaggacttttacccttttccaaaggcctgtacaccagatttaaagggtctcttg
cattatgaagaaagcactcaaaagttatttcagtgtgatgggataacatggaaattctgg
aattcccaaagcaaggaggtaagcaggaagaaatgtccttctggatggagttatcatgag
ggcagctgctacttcctggtagtgaatcacaaggtcacctggaacactgctgctcaggct
tgcagagaacaatacctggggagtctagcaagtgtggctaatgaacaacatatgcagtgg
ctgtgggactttggtagaaggatgcccttttggataggcttgaatgaccagctcaatcct
ggacactgggagtggaatggaggagaacctgtaacctacataaactggagaagaggctcc
taccgctttccagtgggaggaagaaattgtgtatttgtgcagaagcgaggaaaatggcaa
gcaactgactgcaagaatgtcaaaccaaacagctatatatgttcaagaaagttgtaa
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integrated database retrieval system
