Empidonax traillii (willow flycatcher): 114058502
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Entry
114058502 CDS
T05887
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114058502 (RC3H2)
04121 Ubiquitin system [BR:
etl04121
]
114058502 (RC3H2)
Transcription factors [BR:
etl03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
114058502 (RC3H2)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114058502 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
114058502
NCBI-ProteinID:
XP_027741713
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIANLESGVPQLIPRCADTSLRALENTKKGGKTGANGQNASGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSA
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGESDYTEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQDDQLLNGTTVENGHLLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaatgag
tttgatgagaatgtgcacaaacccatcagcttaggctgctctcacaccgtgtgtaagacc
tgcctgaacaagctccatcgcaaggcatgtcctttcgaccagaccgccatcaacaccgac
atcgacgtgcttcctgtcaactttgcactcctccagctggttggagcccaggtacctgat
caccagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaaccagagtgccctgagccgtccaatgcagaggaaactcgtgacactggtgaactgt
cagctggtggaggaggagggtcgggtcagagccatgagggcagctcggtccctgggggag
agaactgtcacagaactcatcctgcagcaccaaaatcctcagcagctttctgccaatctc
tgggctgctgtcagggcacgagggtgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtcttactggcactggaagatggctctgcactctcaagaaaagttctggta
cttttcgttgtgcaaaggctggaaccaagatttcctcaggcctccaaaacgagcattggt
cacgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaactgaaggaggagttccggagttacgaggcgctgaggagggagcac
gatgcccagatcgttcacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttcccttctttatggagacttggcacataaatcacacatgcagtccattattgacaag
ctccaatctccagaatcttttgcaaagagtgtacaagaattgacaattgtcttgcagcgc
acgggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcctctccaacatgggagcagctggaaaatgcaatggtcgct
gtaaagactgtggtccatgggctggtggatttcattcagaattacagcagaaaaggccat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaagggggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaataccgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttctc
aacaaagttggcgtcaatagcaccgtctcaaccacaacggggaacgtcatctctgtcata
ggaagcccagaagcaacagggaagatggtgccaagcaccaatggaatagctaatctggaa
agtggggttccccaactgatccctcgctgtgcagacacctccctgagagctctggagaac
accaagaagggagggaagaccggagccaatggccaaaatgcttctgggtcccctacagaa
tcactccctgaaaataaaatcggttctccgcccaagactcctgtcagccaggcagcagct
acctcagctggtcctcccaacattgggacagaagtgaattctgtgcctccaaaatccagc
ccgttcgttcccagagttcccgtctaccctccgcattctgataacgttcaatatttccaa
gatcccaggactcagctgtcatatgaagttccacagtacccacagacagggtattatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagagtcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagaccgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcccgtcccctctggaatgtacgctccagtttatgacagcaggcgcatctgg
cgcccgcagatgtacccccgggatgatattattaggagcaattccttacctcccatggat
gtgatgcactcgtctgtctatcagacatcgttacgggagaggtacaactctctggatggg
tattactctgtggcttgtcaacctccaaacgagcagaggactgtgcctttaccaagggag
ccttgtggtcacttgaagactggttatgatgagcagctgaggcggaagccggagcagtgg
gcacagtaccacacacagaaaactcctctggtatcgtcaacccttcccatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattccaatgccgtgttgatggacttggacagtggggatgttaaaaggagagtgcac
ttgtttgagacgcagaggagggcgaaggaggaggatccgataatcccgttcagcgacgga
cccatcatctccaagtggggtgcaatctccaggtcatcccgcacgggttaccacacgaca
gatcccatccaggccactgcttcccaaggaagtgctactaagcccatcagcgtgtcagat
tatgtcccttatgtcaatgctgttgactcaagatggagtgcctatggctcggattctgct
tcatcagcacgttatgcagaacgggacaggttcatagttacagatttgtctggtcacaga
aagcattccagcactggagatctactgagtattgaattacagcaggccaaaagcaattcc
ttactactccagagagaggccaatgccctggccatgcagcagaagtggaattctctagat
gaaggcagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
tctgattatactgaagactgtgcagacacaaagcccgatcgagacattgaattggagctg
tcagcccttgatacagacgaacctgatgggcaaggtgaacaaatagaagagattctggac
atacagctggggattagctcccaagatgatcagctgctcaacggaacaactgtagagaac
gggcatctgctaaagcagcaccagaaagaatctatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga
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integrated database retrieval system
