Empidonax traillii (willow flycatcher): 114060105
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Entry
114060105 CDS
T05887
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114060105 (CHD5)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114060105 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
114060105
NCBI-ProteinID:
XP_027745107
LinkDB
All DBs
Position
Unknown
AA seq
1954 aa
AA seq
DB search
MRGPAAARDLLEEADNEEDVSEEDDGVLEGLDEFFAEEQVVVPKKKKSKKLKDGKAAKIK
RRKKEGSNDEMSDNEEEMEEKSESEGSDYSPNKKKKKKLKDKKEKKQKRKKKDEEEDDNE
DGILKEPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPALTASPQHSALPPVIRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSA
SINSSSVRSECSAGLGKRGKKRKKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEEGGEEEEDDHMEFCRVCKDG
GELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAALL
PPVLPTPDPELAVPPPKVLEGIPEREFFVKWVGLSYWHCSWVKELQLELYHTVMYRNYQR
KNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEEQFYRYGIKPEWMMIHRILNHSFDK
KGDIHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKLLYWNHRELMLGEDTRPLKKLNKKGK
KVKEEKLEKPPETPLVDPTMKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILA
DEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK
ESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACL
VVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGF
LEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL
TRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSG
KLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAID
RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM
IYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD
VEGMVSQGQRITMPDAVTPFSDTLSTKGGSVTPSMKKKHGGTPPGDNKDVDDSSVIHYDD
AAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDY
WEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDVVLEGPESKRSSEVVSSDPNTPVPASPAHTH
TGPDKIEAQLGFHEEKDPVEQKPRKVADSQVPASAEKVENEEHPESCDSKERLREEKQEE
SEKTEPSPEPPVKGLFPPADEGIQEQEKPLEKVELSSSPGKGEDKEVKPDGKEEDKEQTE
VQQNGDKEEEEDGKKDDRNMNFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYDIWHRR
HDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQA
LVIEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHK
VLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPTVQGSFGSS
QMYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccggccgccgcccgggacctgctggaggaagcggacaacgaagaagatgtg
tcggaagaagatgatggggtgctggaaggactggatgagtttttcgctgaagagcaagtt
gtggtgccgaaaaagaagaaatccaagaagctgaaagatggcaaggctgccaaaatcaag
aggaggaagaaggaggggagcaatgatgaaatgtcagacaatgaagaggagatggaggag
aaatctgagagtgaaggaagtgactattcccccaacaaaaagaagaagaaaaaactgaag
gacaagaaggagaaaaagcaaaaacggaagaagaaggatgaagaggaggatgacaatgag
gatggaatcctgaaggagcccaagagctcagcccagctgatggaggaatggggccttgat
gatgtagattacgttttctcagaagaggattatcatactctgacgaattacaaggctttc
agccagttcctcaggcctctgattgccaagaagaatcccaagatccccatgtccaagatg
atgacggtgcttggcgccaagtggcgagagttcagtgccaacaaccccttcaagggcagc
tcggcggcggcagccgcagcagccgtggctgcagccgtggagaccgtcaccatcgccccg
gctctcaccgccagcccccagcactctgccctgccccccgtcatcaggaaggccaagacc
aaggaggggaagggtccaggtgtgcggaagaaaatcaagggctctaaagacgggaagaaa
aaagggaaggggaaaaagatggcaggcttgaaattccgttttgggggaatccccagcaaa
aggaaaaagggctcctctagtgaagaggaggaacgagaagaatctgactttgacagcgcc
agcatcaacagctcctctgtacgctctgagtgctcagctggcctggggaagagagggaag
aagaggaaaaagaaaaagaggatcgaagaaggggacgggtacgagacggaccaccaggac
tactgtgaagtgtgccagcagggcggggagatcatcctgtgtgacacctgcccccgtgcc
taccacctggtctgcctggaccctgagctggagaaggcccccgagggcaagtggagctgc
ccccactgtgagaaggagggcatccagtgggagccgaaggaggaggaggaggaggaagag
gaaggtggcgaggaggaggaggatgaccacatggagttctgccgggtctgcaaggatgga
ggggagttgctgtgctgtgatacctgcccatcctcctaccacctccactgcctgaacccg
ccactgccagagataccaaacggtgaatggctctgcccacgctgtacatgccctcccttg
aagggcaaagtccagcgcatcctgcactgggcctggaaggagccaccggctgccctgctc
ccacccgtgctgcccaccccggacccggagctggctgtccccccgcccaaggtgctggag
gggatcccggagcgcgagttctttgtgaagtgggtgggcctctcctactggcactgctcc
tgggtgaaggagctgcagctggagctctaccacaccgtgatgtaccgcaactaccaacgc
aagaacgacatggacgagccgccggccttcgactatggctctggggacgaggacagccag
agggagaagcggaagaacaaagacccccagtatgccaagatggaggagcagttctaccgc
tacggcatcaagcccgagtggatgatgatccaccgcatcctgaaccacagctttgataaa
aagggagacatccactacctgatcaagtggaaagacctgccgtacgaccagtgcacctgg
gagatcgacgacatagacattccctactacgacaacctcaaactcctctactggaaccac
agggagctgatgctgggggaggacacgcgccctctgaagaagctgaacaagaaagggaaa
aaggtgaaggaggagaagctggaaaagcctccagaaacgcctcttgtggatcctacgatg
aagtttgacaagcagccgtggtacatcgatgccacgggaggcacactgcacccttaccag
ctggaagggctgaactggctgagattctcctgggcccaagggacagatacaatcctggct
gatgagatgggactgggaaagacagtgcagactatcgtgttcttgtattccctgtacaag
gagggccactcgaaagggccatacctggtcagcgcccctctctccaccatcatcaactgg
gagcgtgagttcgagatgtgggcacccgacttctacgtggtgacctacacaggagacaaa
gagagccgctcggtcatccgggagaatgagttttcttttgaagacaacgctatccgcagt
gggaagaaggtcttccggatgaagaaggaagcccagatcaagttccatgtcctgctcacc
tcctatgagctgatcaccattgaccaggcagtgctgggctccatagagtgggcctgtctg
gtggtggatgaagcacacaggctgaagaacaaccagtccaaattctttagagtattgaat
agctacaagatcgattacaagctgctcctcacagggactccgctccagaacaacttggaa
gaactcttccacctgctcaatttcctgactcccgagagatttaacaaccttgaggggttc
ctggaggagtttgcagacatctccaaggaggaccagatcaaaaagctccatgacctgctg
ggtccccacatgctgcgacggctcaaggctgatgtgttcaagaatatgccagccaagacg
gagctgatcgtgcgagtggagctgagccagatgcagaagaagtactacaaattcatactg
acgaggaactttgaagccctgaattcgaaaggtggtgggaaccaggtctcactgctcaac
atcatgatggacctgaagaagtgctgcaatcacccatacctgttccctgtggcagctgtg
gaggccccggtgctgcccaatggatcctatgatgggaattctttggtcaaatcttctgga
aaactgatgctgctccaaaagatgctgaagaagttacgggatgggggtcacagagttctg
atcttctcacagatgacgaagatgctggacttactggaggatttcctggagtatgaaggc
tacaagtacgagcggatcgacgggggcatcaccggtggcctgcgccaggaggccatcgac
aggttcaacgctcctggggctcagcagttctgctttctcctctccactcgtgccggtggt
ctgggcataaaccttgctacggctgacaccgtcattatttatgattctgactggaatcct
cacaatgacatccaggcgttcagcagagctcaccgcatcgggcagaacaagaaggtgatg
atctaccgcttcgtgaccagagcctctgtggaggagcgcatcacccaggtggccaaaagg
aagatgatgctcacccacctggtggtccgcccagggcttggctccaagtcgggttccatg
acgaagcaagagctggacgacattctcaagtttgggacggaagagctcttcaaggatgat
gtggaaggcatggtgtctcagggacagcggatcacaatgccggatgctgtcacccctttt
tctgacacactgtcaaccaaagggggttcagtgactcccagcatgaaaaaaaagcatggt
ggcaccccaccaggtgacaataaggatgtggatgacagcagtgtgatccactacgatgat
gctgccatctctaagctcttggatcgaaaccaggatgcgactgatgatacggagctgcag
aacatgaacgagtatctcagctcctttaaagtggcccagtatgttgtgagagaagaggat
ggtgtggaagaggtggaacgtgagatcatcaagcaagaggagaacgtggaccctgattac
tgggagaagttgctgcggcaccactatgagcagcagcaggaagatctggccaggaacctg
gggaaagggaagagaatccgcaagcaggtcaactacaacgacacctcacaggaggaccaa
gagtggcaggatgagctctctgacaaccagtcagagtactccatcggctccgaggatgag
gatgaagactttgaagagaggccagaaggccagagtggccgaagacaatcccggagacag
ctgaagagtgaccgggacaaacctctccctcctttgctggcaagagttggggggagcatc
gaggttctgggcttcaacgcccggcagcgcaaggcattcctgaacgccatcatgcgctgg
ggaatgccgccccaggacgccttcaactcccactggctggtccgggatctacgagggaag
agtgagaaggagttcagggcatacgtgtctctcttcatgagacacttgtgtgaacccggg
gcagacggtgctgaaacctttgcggacggcgttcctcgggaagggctgtcacgccagcac
gtgctgactcgcatcggggtcatgtcgctagtaaggaagaaggtccaggaattcgagcat
gtcaatgggaagtacagcaccccagatgtggttcttgagggcccagagagcaagaggtcc
agtgaagttgtgtcttcagatcccaacacacccgtcccagccagcccagcacacacgcac
acgggaccagacaaaatagaagcacagctggggttccatgaggaaaaggacccagtggag
cagaagcccaggaaggtggctgacagccaggtgcctgcaagtgctgagaaggtggagaac
gaagagcacccagaaagctgtgacagcaaggagaggctgagggaagagaagcaagaggag
agtgaaaagactgagccttctcctgagcccccggtgaaaggcctattccctcctgcagat
gaggggattcaagagcaagagaagcctttggagaaggtggagttgagcagcagcccaggg
aaaggggaggacaaagaagtcaaaccagatggcaaggaggaggacaaggagcaaacagag
gtccagcaaaatggtgacaaagaggaagaggaagatgggaagaaggatgacagaaacatg
aacttccgattcatgttcaacattgctgatggtggcttcacagagctgcacacgctgtgg
cagaatgaggagcgggctgccatgtcctccggcaagatctatgacatctggcaccgccga
cacgactactggctgttggcaggaattgtcactcatggctatgcccgctggcaggacatc
cagaacgacccgcgctacgtgatcctgaatgaaccattcaagtcggagatacacaagggg
aactacctagagatgaagaacaagttccttgcccggcggttcaagttgctggagcaggcc
ctggtgatcgaggagcagctgcggagggcggcgtacctcaacatgacccaagaccccagt
cacccggccatggcactgaacgcgcggctagcagaggtggagtgccttgccgagagccac
cagcacctctccaaagagtctcttgctggcaacaaacctgccaacgccgtcctgcacaag
gtgctgaaccagctggaggagctgctgagtgacatgaaggccgatgtgacccgcctgccc
tccatgctgtcccgcatcccgcccgtggctgcccggctgcagatgtcagagcggagcatc
ctcagccgcctggccacccgcggaggggacccgactgtccagggctcctttggctcttcc
cagatgtacaacaataactttgggccaaatttccgtggtcctgggccaggtgggattgtc
aactacagccagatgcctctgggaccctacgtgactgatatttag
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integrated database retrieval system
