Empidonax traillii (willow flycatcher): 114063777
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Entry
114063777 CDS
T05887
Symbol
TYW1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etl03016
]
114063777 (TYW1)
Enzymes [BR:
etl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
114063777 (TYW1)
Transfer RNA biogenesis [BR:
etl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114063777 (TYW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Flavodoxin_5
Flavodoxin_NdrI
Motif
Other DBs
NCBI-GeneID:
114063777
NCBI-ProteinID:
XP_027752103
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MDMWSYFHTCLASIWLHRFYIYSAVALGISLWIVIQFTTTKTKKKGEKSSGNPTSSRGTE
DKLVNGCATPQAKEVYVTGVKIFYGSQTGTAKRFAKALAEAVTSLNLPVEVVNMGDCDPD
DCLAEEATSRNVCVFLVATYTDGQPPESAAWFCKWLEEAASDFRVGKTYLKGLRYAVFGL
GNSVYVDHYNTVGRRVDRWLWVLGASRVMTRTEGDCNVARSRHGSIEGDFEAWKAKFLTR
LQALCRGERKPCSGKCKKGKCRSPGKQSKESSDHEHGVSEHENTEAEELFETSSEEEADA
EEAGGTNAVVDVEDLGNIMGHMKKAKGEHELQEGDVGRRENPGRKEEEEEKREMITPALR
DALTKQGYKLIGSHSGVKLCRWTKVGPLSFSPLVDKTKLETYSVSEKAVKCLKKNLSNSD
VATEESRGAVFIKEPEFNAVLECLVSSPCRHHTNPVGTEWRWKMDQPELILQEAIENHQN
MIKQFRGVSGVKADRFEEALTVKHCALSLVGEPIMYPQINRFVRLLHQHSISSFLVTNAQ
FPEEIRSLEPVTQLYVSVDASTRESLRRIDRPLFKDFWQRFLDSLKALAEKVRS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtggagctacttccatacttgcctggcgtccatatggctgcacagattttac
atctactctgctgttgctttggggatcagcctgtggattgtcattcagttcaccaccacc
aaaaccaaaaagaagggtgaaaaatccagtgggaatcccacttcctccagagggacagaa
gacaagctggtaaatggatgtgccacccctcaggcaaaggaggtgtatgttactggagtg
aagatcttctatgggtctcagactggcacagcaaagaggtttgccaaagctctggctgaa
gctgttacttcccttaatttgcctgtggaagtcgttaacatgggagactgtgacccagat
gactgtttggcagaggaggcaaccagcaggaatgtctgtgtgttcctggtggccacgtac
acggatgggcagcccccggagagtgcggcctggttctgcaagtggctggaagaggcagcc
agcgatttccgtgtggggaaaacctacctgaaggggctcagatatgccgtgtttggcctg
gggaactcggtgtatgtggatcattacaacacagttggcaggagggtggacaggtggctg
tgggtgctcggtgccagccgtgtgatgacacgcaccgagggcgactgcaacgtggcgcgg
agcaggcacggcagcatcgagggcgacttcgaggcctggaaagccaaattcctcactcgg
ctccaggccctctgcagaggggagaggaagccctgcagtgggaagtgcaagaaagggaag
tgcagatccccagggaagcagagcaaggagagctcggatcatgaacatggagtgtcggag
cacgagaacactgaggcagaggaattgtttgaaaccagcagtgaggaggaagctgatgct
gaggaagctggaggcacaaatgctgtcgttgatgtagaagatctcggcaatatcatgggt
cacatgaagaaagcaaagggagaacatgagctccaggaaggagatgttggaaggagagag
aaccctggcaggaaggaggaggaggaggagaagagggagatgataacgccggccctgagg
gacgcgctcaccaaacaaggttacaaactcattgggagccattccggggtgaagctctgc
cgctggacaaaggtgggccctctttccttttctcctctggtagataaaacaaagctagag
acttactcagtgtcagagaaggccgtgaaatgtttaaagaaaaacttgtcaaactccgat
gttgcgactgaggaaagcagaggagctgtttttattaaagaaccagaatttaatgcagtg
cttgagtgccttgtgtcctctccctgcaggcaccacacgaacccagtgggcacagagtgg
cgctggaagatggaccagccggagctgatcctgcaggaggcgattgagaaccatcagaac
atgatcaagcagttcagaggtgtgtcaggagtgaaggctgatcgctttgaggaggccctg
acagtgaaacactgcgctctgtccctggtgggggagcccatcatgtacccccagatcaac
cgcttcgtgaggctcctgcaccagcacagcatctccagcttcctggtgaccaatgcacag
ttcccagaggagatcaggagcctggagccagtgacccagctgtatgtgagtgtggatgcc
agcaccagggagagcctgaggagaatcgacagacccctcttcaaggacttctggcagaga
tttctggacagtttaaaggccttggctgaaaaggtacgcagttaa
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