Empidonax traillii (willow flycatcher): 114063914
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Entry
114063914 CDS
T05887
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114063914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etl03041
]
114063914
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114063914
Spliceosome [BR:
etl03041
]
Complex A
U2 snRNP components
U2 related factors
114063914
Complex B
114063914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Motif
Other DBs
NCBI-GeneID:
114063914
NCBI-ProteinID:
XP_027752293
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All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRGKRDDRRSRSRDRDRRRERSRSRDKRRSR
SRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKSRKTENRSRSKE
KTEGVEVSKEKKKDKDDKEEEKDKDATTNAVATENFDQNKLEEEMRKRKERVEKWREEQR
KKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEV
KEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEYS
SEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRL
ELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGI
AKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLR
VVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgagtccaggcattatcggaagcgctccgcgtctcgtgggcgctccgggagc
cgctccaggagtcgttccccgtcggacaaaaggggcaaacgggacgacaggcgctccagg
agcagggatcgggatcgcaggcgggagaggtcccgcagcagggacaagagaaggtcccgg
tcgcgggacagaaagcgccaaagacgctcaaggagcagagaaagggagcggagccgagag
aggagacgatcccggagccgggagaggaggcgctcgaggagcaggagtagagggagacgg
tctcgatcctccagtccaagcaagagcaggaaaacagagaacagatcaagatctaaagaa
aagacagaaggagtagaagtttccaaagaaaagaaaaaagacaaagatgacaaggaagaa
gagaaggataaagatgctactacaaatgccgtggccaccgagaatttcgatcagaacaaa
cttgaagaagaaatgagaaagcgaaaggaaagagtggagaaatggagggaagaacaacgc
aagaaggcaatggagaacataggagagctgaaaaaagaaattgaagagatgaagcagggc
aaaaaatggagtttagaagatgatgatgatgatgaagaggaaactgcagaaggagaaaaa
gaaggcaatgaggttgaagatgaggagttagatcctttggatgcttacatggaagaagta
aaagaagaggtcaagaagttcaatatgagaagcgtgaaaggtggaggtgggagtgaaaag
aagtctggaccaactgttaccaaggtggtaaccgtggtgacaaccaaaaaagcagctgca
gagtcagaaaagaagaaaggggagctcatggagaatgaccaagatgcaatggagtattcc
tcagaggaggaggaggttgatcttcagactgccctgactggctatcagaccaagcagagg
aagctgctggaaccagtggatcatggaaagatagaatatgaacctttcaggaagaacttc
tacgttgaagtgccagaactggcgaaaatgactcaggaagaggtgaacgtgtacaggctg
gaattggagggaattacagtcaagggaaaaggctgccccaaaccaataaaaacctgggta
cagtgtggtatttccatgaagattctcactgccctcaaaaaacatggctatgaaaagccc
actcccattcagacccaggctatcccagcaatcatgaacggacgggatttgattggcatt
gccaaaacgggaagtggaaaaaccatcgccttcctgttgcccatgttcaggcacatcatg
gatcagagagcattggaagaaggagaaggtcccatagctgtcatcatgacacctactcgt
gagctggctttgcagattaccaaggagtgcaagaagttctcaaagacacttgggcttcga
gttgtctgtgtttatggagggacaggaatcagtgaacagatagctgaactcaaaagaggt
gctgaaattattgtttgcacacctggccgtatgattgacatgttagcagctaacaatggt
gagtag
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