Empidonax traillii (willow flycatcher): 114066301
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Entry
114066301 CDS
T05887
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etl03009
]
114066301
03036 Chromosome and associated proteins [BR:
etl03036
]
114066301
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114066301
Ribosome biogenesis [BR:
etl03009
]
Eukaryotic type
Pre-60S particles
Helicases
114066301
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
114066301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
114066301
NCBI-ProteinID:
XP_027756674
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MGAVLGRAARLGLPAARLGLPAAPAGSVAGRPRWLCGVGAAPLVLLAAALPRGPARPPHF
LRAGAGRASWGRRAESGSGSGAAAAHLPGEQPPAMPAAEPEHSPAEPQAPAAAEPPRRGR
RRKAKEEGTEGKAKRRGKAEGELAQPEESGLGDGDLEPPVPKKTKKIKEKSSGLVGESDV
AQHALESSAAASDSGTAPAAQSGADGEQDSDAEELTEEAKEGAFSNFPLSQNTINLLTAR
GVKYLFPVQVKTFQPIYDGKDVIAQARTGTGKTLSFALPLIEKLQSVPQDGRRGRAPKVL
VLVPTRELATQVAKDFKNLTRKLSIACFYGGTPYKEQLDLLRSGIDILVGTPGRIKDHVQ
NSKLELSSVKHVVLDEVDHMLDMGFAEQVEEILGFAYKKGSENNPQTLLFSATCPRWVYD
VAKKYMKEEYEQIDLIGKKTQRTATTVEHLAIQCRSSQRAGVLGDIIQVYSGSRGRTIVF
CETKKEANELAMNASLKQDAQSLHGDIPQQQREVTLKGFRTGVFEVLIATNVAARGLDIP
EVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGICICLFQRREEDLLKQVEHKAGITFKRVG
VPSATDVIKASSNDAKKLLEAIPASAVDYFRKSAEELIEEKGAVAALAAALAHISGAAYI
QQRSLLNSTAGFVTMVLKCSIEMHTMGYAWRGLKEQLGEEVDNKVSAMRFLKGKMGVCFD
IPVDELSNIQEQWKDTRRWQLSVAKELPELEEYPQEAGREFSRFGNGRQGNFKRNSWFKS
GNRGL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgtgttgggccgggcggcgcggctggggctcccggcagcgcgcttggggctc
ccggcggccccggcgggcagcgttgctgggcggccccgctggctgtgcggtgtcggggcg
gctccgctggtgctgctggcggccgcgctgccccgcggcccggcccgccctcctcacttc
ctgcgcgccggggcggggcgcgcgtcctggggccgccgagccgagagtggcagcgggagc
ggcgcggccgccgcgcacctgcccggggagcagccgccagccatgcccgccgccgagccc
gagcacagccccgccgagccgcaggcccccgccgccgccgagccaccgcgccgcggccgc
cgcaggaaggccaaggaggaaggcacggaggggaaggcgaagcggcgcggtaaggccgag
ggcgagctggcgcagcccgaggagagcgggctgggggatggcgacctcgagccgcccgtg
cccaagaagacgaagaaaatcaaggagaagagcagcggtttggtgggagagagcgacgtc
gcccagcacgcgctggaatcttctgctgctgcgagcgacagcgggacagccccggctgcc
cagagcggggccgatggagagcaggacagcgacgccgaggagctgacagaagaagcaaag
gaaggcgccttctctaatttccctctctcccaaaacactattaaccttctcacagctcga
ggtgtaaaatacctgttccctgtgcaagtgaagaccttccagcccatatatgatggcaaa
gacgtcattgctcaagctcgaacgggaaccgggaaaaccctttcctttgctcttccgctg
attgagaaactgcagagtgtcccccaggatggcagaagaggccgtgcacccaaagtactg
gttcttgttccaaccagggaactggctactcaggtagccaaagacttcaagaatctcaca
aggaaactgtcaattgcttgtttttatggaggaactccatataaagaacagctcgatctc
cttagaagtggcattgatattctagtgggaactcctgggcggatcaaagaccacgtccag
aacagcaagctggaactttccagcgtgaagcatgttgttttggatgaagtggatcacatg
ttagacatgggctttgctgaacaagtggaagaaatcttaggatttgcttataaaaagggc
tctgagaacaaccctcagacactgctgttttccgcgacttgtccgcggtgggtgtatgat
gtagccaagaagtacatgaaagaggagtatgaacagattgacctgattggaaagaagacc
caaaggacagccacaactgtggagcacttggcaatccagtgtcgctcctcgcagagagca
ggagttcttggggacatcatccaggtctacagtggcagccgtgggcggaccattgtcttc
tgtgagaccaagaaggaggcaaatgagctggccatgaatgcctcgctcaagcaggatgcc
cagtccttgcatggagacattccacagcaacagagagaagttacattaaaaggcttcaga
accggcgtgtttgaagttctgattgcaacaaatgtagctgcccgtggtttggatattcct
gaggttgacctcgttatacagtgctcaccaccaaaagatgttgattcctacatccaccgt
tctgggcggacaggccgcgctggccggaccggcatctgcatttgtttgtttcagagaaga
gaagaagatcttctgaaacaagttgagcacaaagcggggattacatttaagcgtgtgggc
gttccctctgctacagatgtaattaaagcttcaagtaatgatgccaaaaagttgctggag
gccattcctgcttctgcagtcgactacttcagaaaatctgctgaagagctcatagaggag
aagggggcagtggctgccctggctgcagccctggcccatatttcaggggcagcttacatc
cagcagcgctccctgctcaactccacggccggctttgtgaccatggtgttgaagtgttcc
atagagatgcacaccatgggctatgcctggagggggctcaaagaacagcttggggaggag
gtggataacaaagtatctgcaatgcgtttcctcaaggggaagatgggggtgtgctttgat
atccctgttgatgaactgagtaacatacaggaacagtggaaggacaccaggcgctggcag
ctgtcggtggcaaaggagttgcctgaactggaagagtatccccaggaggcgggacgagag
ttctcaaggtttggaaacgggaggcaaggcaacttcaagaggaacagctggttcaagagt
ggaaaccgaggactttaa
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