Empidonax traillii (willow flycatcher): 114066793
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Entry
114066793 CDS
T05887
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04270
Vascular smooth muscle contraction
etl04625
C-type lectin receptor signaling pathway
etl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
114066793 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114066793 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
114066793 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114066793 (ARHGEF12)
Membrane trafficking [BR:
etl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
114066793 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
PDZ_6
PDZ
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
114066793
NCBI-ProteinID:
XP_027757577
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEL
AGFGHMSPIMTSPHSPGTSGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQSL
QEEYGRSPTPRLLKEIQEAKKHIPQLQEQLSKATGCTQDGVLPSRSVSESLQISEGEAES
GDCGSKLDYSGDSPSRPNSDIADSPRSGLKERIYPDESPEKPEVQDTDSQSSVGSPLSRV
GTQIIGAEDDDFDTEQEQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLY
TDLYKQTNSKETRRVFLEFYQFFLDRAANLKVPVPDEISLELDRRRPELLPEELHRQFIQ
TMQDKVCPEVQRNLEDFRQKRSMGLTLAEGELTKLDAERVRDRNAVEKERSCAEQIIAKI
EEVLMTSQPLEEDKSSTMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEK
EGEEKGKRRGFPNILGPPRRPSRHDSSAIGRAMEMQKPRHPKHLPTASSVSPEPPDSSKI
RQSGSSSDGTDAPYPPANPMSPLAMGPFSSPEGSKDSETGLKQPGEAPPASDSMDGTPRT
PNTTFEFPSPLENLQEEEGESERMVDVGTPKPFRKMDSVGFADVQSEDELYDFDMDTDPP
NWQQLVSREVLMGLKPYEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILSSSD
KRKIFSNLEDILGLHVALNDQMKTVRKRNETSVIGQIGEDLLSWFSGAAEEKLKHATATF
CSNQPFALEVIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNI
AKYTELPEEKEKVKKAADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMM
DEFRNLDLTKRKMLHEGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILA
STADSKHTFSPIIKLNTVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLI
AQMAGTVKMGSARRVIPLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPL
MLNAQSSSPIMSEKAKVESLLVSEGQFEKVQQAELTLKDSSAGYEHTATSSPSLSEGQWA
RDALRNLGLLRQLLVQQFGLAEKGTLEERQRFPRFRTVSQESGNELQHSDSDKFQPGSDR
TPPRTEEPTAGYGLRTSAESPAPGDAMQLVGRDPRPGGNLGTDRGSATLEAPTPELEGVG
AEESGEHFFDAREAHSDENPSESELMERKEEEEVQIRISGEVQDEEPLPCLP
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctggagtgcaaacaggggatagaattatcaaggtgaacggcaccctcgtaaca
cactcgaaccacttggaggtggtaaagctgatcaagtcgggttcctatgtagctctcact
gtccaggggcgcccaccagggtcgccccagattcccttggctgattctgaagtggagctg
gcaggatttgggcatatgtctcccatcatgacatctccccactcacctggcacatcagga
aatgcagaaaggatcaccagcccagtgcttatgggggaggagaataatattgtccacaac
cagaaggtggagattctgaggaagatgctacagaaggagcaggagaggctgcagtctctc
caagaggagtacggccggtcccccaccccccgcctgctcaaggagatccaggaggccaag
aagcacattcctcagctgcaggagcagctctccaaagccacgggctgcactcaggatgga
gtgttgccctccaggtctgtgtcggagtcgctgcagatcagcgagggggaggcagagagt
ggggactgtgggagcaaactggattacagtggggacagcccctccagacccaacagtgac
attgctgatagtcctcgcagtggcttgaaggagaggatttatccagatgagagcccagaa
aagcctgaggttcaagatactgattcccagtccagtgttggaagtcctttatcccgagtg
gggactcagatcattggagcagaggatgatgactttgacacggaacaggagcagatcaat
ggacagtgcagctgcttccagaacatcgagctcctcaagtctcgcccagctcacctggct
gttctcctgcaccatgtggtgtcccagtttgatcctgcagcgctgctgtgctacctttac
actgacctgtacaaacagaccaactccaaagagacccggagagtcttcctggagttttac
cagttcttcctggacagagctgcaaatctcaaagttccagttccagatgaaatctccttg
gaactagacaggagaaggccagaactccttcctgaggagcttcaccgccagttcatacaa
actatgcaagataaagtgtgtccagaagtccagaggaacctggaagatttcaggcagaaa
cgcagcatggggttgaccctggcagagggggagctcaccaagctggatgcagagcgggtg
cgggacaggaacgcggtggagaaggagagaagctgcgccgagcagatcatcgctaaaatc
gaggaggtcttgatgacatctcagcctttggaagaagacaagagctccacgatgcaatac
gtgattcttacctacatgaagcacctgggagtcaaagtgaaggagcctcggaacctggag
cagaaacgtggccggatcggtttcctgcccaagatcaagcaaagcatcaagaaagagaaa
gaaggagaggaaaaagggaagaggagaggctttcccaatattctgggcccaccgaggaga
ccgagtcgacacgacagcagtgcaattggcagagccatggagatgcagaagcccaggcac
ccaaagcacttacccacggcctcttctgtgagcccagagcccccagattccagcaagatc
cgccagagtggctcctccagtgatggcacagatgctccatacccacctgccaaccccatg
tcccccttggcaatggggcccttttcctccccagagggaagcaaggacagtgagacaggt
ttgaagcagcctggagaagctccacctgccagtgactccatggatggcacaccccgcaca
cccaacaccacctttgaattcccatctcctttggaaaacctgcaggaggaggagggagaa
tcagagagaatggttgacgtgggaacaccaaagccttttcgcaagatggacagtgttggc
tttgcagatgtgcagagcgaagatgagctctacgattttgacatggacacggaccctccc
aactggcagcagctcgtgagcagagaggtgctgatggggctcaaaccctacgaaatcaag
cgccaggaagtgattaatgagctgttttacacagagagagcccacgtccgcacgctgaag
gtcctgcacaacgtcttctaccagcgcgtgaccagggaagggatcctcagctccagtgac
aagcgcaaaatcttctccaacctggaggatatccttggccttcatgttgcactgaacgat
cagatgaaaactgtccgaaaaaggaacgagacttctgtcattggccaaattggggaagac
ttgctttcctggtttagtggagcagcagaggagaagctgaagcacgccactgccacgttc
tgcagcaaccagccctttgccctcgaggtcatcaagtcccgccagaagaaggactcgcgc
ttccagaccttcgtgcaggatgctgagagcaatcccctgtgccgccggctgcagctgaag
gatatcattcccacggagatgcagaggttgacaaagtacccccttctgctggataacatt
gctaagtacacagaactgcctgaggagaaggagaaagtcaagaaagcagcagatcactgt
cgtcagatcctcaaccacgtgaaccaggctgtcaaggagtcagagaacaagcagcatttg
gaagattaccagcgtcggctcgacctgtcctacctgaagcagtctgaggatcccatgatg
gatgagttcaggaacttggacctaacaaagaggaaaatgctccatgaagggcctctgact
tggaaggtgaatcgtgacaaaaccattgatctctacactctgctgctggaggacattctg
gtgctgctgcagaaacaagatgataaactggtgctgaagtgccacagcaagatcttggcc
tccacggccgacagcaaacacaccttcagccccatcatcaaactcaacaccgttctggtt
cgtcaggtggcaacagataacaaagctttcttcgtcatctccatgtcggagaacggcgct
cacatttacgagctggtggcacagactgtctccgagaagaacgtgtggcaggaccttata
gcccagatggcagggactgtgaaaatggggagtgccaggagagtgattccattaccacag
tcaggccctggagaggaggagcgtgaagaagaggagcagcagaagctcaaagagcagcac
gacattcctgccagcagcctccaaagcccagataaagatttgggactggaatctccctta
atgctgaacgctcagtcctcctcacccatcatgtctgagaaggccaaggtggaaagtctg
ctggtgtctgaagggcagtttgagaaggtgcagcaggcagagctgacgctcaaagactcc
tctgcaggttatgaacacacagccaccagttccccctcgctgtcagaggggcagtgggca
cgggatgcattgaggaacttgggtttgctgaggcagctgttggtgcagcagtttggcctg
gctgagaaggggaccctggaagagcggcagcgcttccccaggttcaggactgtctcccag
gagagcgggaacgagctccagcactccgacagcgacaaattccagcctggatcggacaga
acgcctcccagaactgaggagcccacagctggttatggcctccggacttcagctgagtct
ccagccccaggggatgccatgcagctggtggggagagaccccaggcccggtgggaatttg
ggaacggaccgtgggagcgcgaccctggaggcgcccaccccggagctggaaggggtgggg
gccgaggagagcggcgagcacttttttgatgctcgggaggctcacagcgatgaaaacccc
tctgagagcgaactgatggagaggaaggaggaagaggaggtgcaaatacggatctcaggt
gaggttcaggatgaggagcccctcccttgcttaccttaa
DBGET
integrated database retrieval system
