Empidonax traillii (willow flycatcher): 114069305
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Entry
114069305 CDS
T05887
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03013
Nucleocytoplasmic transport
etl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114069305 (UPF3A)
03015 mRNA surveillance pathway
114069305 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114069305 (UPF3A)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114069305 (UPF3A)
mRNA cycle factors
P-body specific factors
114069305 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
114069305
NCBI-ProteinID:
XP_027761796
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MRSERGPGPGPGGGRERRPMDMDTPPRRESPRRDTDAPPNPPPPSPPSPLPPPPLLHPAP
GKLREEKKAALSKVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYI
NFRNPEDILLFRDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPE
YKKFLESYCTDEEKICANPEILLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKR
EERRRRELEKKRLREEEKRKRREEERRKRKEVEKQKKISEKEIRIKLLKKPEKGDELASE
KHKEKGEEADIEENKWDKSSGSGSIKSKTLESSLKDLKDKSQNDSDKEQRDLERRFREKE
PERQRYRLDDGRKHRTHYEFDKFMRRNEEELKWGKGYNQDRGKKGNYNYSFTVEAVDKLG
KEDKCDDMASKKERIRNKDRPAMQLYQPGARIRTHMGPTSKTYDCSGKSFEDALDKKYEA
DNSAGAEKTEEGE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcggagcgggggccggggccggggccgggcggcgggcgcgaacggcggcccatg
gacatggacacccccccgcgccgggagtcgccgcgccgcgacacggacgctccgccgaat
cccccgccgccttccccgccctccccgctgccgccgccgccgctgctccacccggcgccg
ggtaaactgcgggaggagaagaaagcggcgctgagcaaagtggttattcgaaggcttcct
ccttgtctaaccaaggaacagcttgaggaacagctacaccctctacctgcccatgattat
tttgagttttgcactgctgatcccagcctttatcctcatctctactcaagagcatacatt
aactttagaaatcctgaggacatccttctttttagagatcgctttgatggctatgtcttc
attgacaataaaggtttggagtatcctgcagtggttgaatttgctccattccagaagatt
tcaaaaaagaagctgaagaagaaagatgccaaagctgggagcattgaagatgatccagaa
tataagaaatttttagagagttattgtactgatgaagagaaaatctgtgccaatcctgag
attcttttgggagagattgaggccaaaacaagggaacttattgctagaagaacaacaccc
cttttggaatatattaaaaatagaaaattagaaaagcagagaatacgagaagagaaaaga
gaagagcgaaggcggagagagttggagaagaagcgtctgcgggaggaagagaaaaggaag
cgcagagaagaagaaagacgtaaaaggaaagaagtggagaagcaaaagaaaatttctgaa
aaagaaataaggatcaagcttctcaagaaacctgagaaaggagatgaactggccagtgaa
aagcacaaagaaaaaggtgaagaagctgacattgaggaaaacaaatgggataaatcatct
ggatctgggagtataaaatccaagactttggagagttcactaaaagaccttaaggacaag
tcacaaaatgatagtgacaaagagcaaagagatttggagagaagatttcgagaaaaagaa
cctgaaagacaaaggtatcgattggatgatggcagaaagcatagaactcactatgagttt
gacaagtttatgagaaggaatgaagaagagctgaaatgggggaaaggatacaaccaagac
agaggaaagaaagggaactacaactacagcttcactgtggaggcagtagacaaactgggt
aaagaggacaagtgtgatgacatggcatccaaaaaggagcgcataagaaataaggatcgc
ccagccatgcagttataccagccaggagctcgcatccgaacacatatgggacctacaagt
aaaacctatgactgcagtgggaaatcctttgaagatgctcttgataaaaagtatgaggca
gataattcagctggagctgagaagactgaagaaggagaataa
DBGET
integrated database retrieval system
