Erwinia tracheiphila: LU633_06960
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Entry
LU633_06960 CDS
T07827
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
etp
Erwinia tracheiphila
Pathway
etp01501
beta-Lactam resistance
etp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LU633_06960
01503 Cationic antimicrobial peptide (CAMP) resistance
LU633_06960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
etp02000
]
LU633_06960
01504 Antimicrobial resistance genes [BR:
etp01504
]
LU633_06960
Transporters [BR:
etp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LU633_06960
Antimicrobial resistance genes [BR:
etp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LU633_06960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
MMPL
Motif
Other DBs
NCBI-ProteinID:
UIA97610
LinkDB
All DBs
Position
complement(1318152..1321265)
Genome browser
AA seq
1037 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIIIMLAGVLSILKLPIEQYPNVAPPAVQITATYPGADAKTLQDS
VTQVIEQNMNGIDGLMYMSSNSDSSGTLQLTLTFQSGTDPDIAQVQVQNKLQLATPLLPQ
EVQQQGINVQKSSSSFLMVAGFVSDSDSMTQNDIADYVASNIKDAISRTPGVGDTQIFGA
QYAMRIWMDPHKLNNYQLTPIDVISAITAQNSQVAAGQLGGSPPVPGQQLNASIIAQTRL
TSTDEFGKILLKVNADGSRVLLKDIAKIELGGENYEVIARYNGKPASGIGIKLATGANAL
DTADAVKAQLAKLEPFFPSGLKVVYPYDTTPFVKISIMEVVKTLLEAIVLVFIVMYLFLQ
NFRATLIPTIAVPVVLLGTFAIISAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
AEEGLPPKEATRKSMEQIQGALVGIALVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMVL
SVVVAMILTPALCATMLKPISKGEHGKTTGFFGWFNRMFDKSTHHYTDSVDHIIRSTGRY
LVIYLVIVLGMAWLFIKLPSAFLPEEDQGLLLAQAQLPAGATQERTQAVLNKVTDYFLTN
EKDNVKSVFTVNGFGFAGRGQNTGIAFVSLKPWSERSGAANKVDGIAGRAMRAFGAIKDG
MVIPFNLPAIIELGNATGFDFQLIDQANLGHDALTQARNQLFGMIAQHPDTLVGVRPNGL
EDTPQYKLAIDQEKAEALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMGTADSRM
LPNDIDKWFVRGSSGQMVPFSAFASAKWQYGSPRLERYNGLPSMELLGQAAPGKSSGEAM
ALMEQLASKLPQGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFAV
MLVVPLGVIGALIFTTLRGLSNDVYFVVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLV
ESTLEAVRMRLRPILMTSLAFILGVLPLTISTGAGSGAQNAVGTGVMGGMVTATVLAIFF
VPVFFVVVRRRFGKNKG
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttcttcatcgaccgccctatttttgcgtgggttatcgccatcattattatg
ctggcaggcgtgctctcgattttgaaactccctatcgagcaatatcctaatgttgccccc
cccgcggtacagataaccgccacttatccgggtgccgatgcaaaaacattacaggattca
gtcacgcaggttattgagcaaaatatgaacggcattgatggcctgatgtatatgtcatct
aacagtgactcatccggtacattacaacttacgctgactttccagtcaggtacggacccg
gacattgctcaggttcaggtgcagaataaactgcagctggccacgccgttactgccacag
gaagttcaacagcaaggcataaacgttcaaaagtcctccagcagttttctgatggtggca
ggctttgtcagcgacagtgacagcatgacgcaaaatgatatcgctgactatgtggcgtcg
aatattaaagatgctatcagccgaacacctggcgtgggcgatacccaaatatttggtgct
caatacgcgatgcgcatctggatggatccgcacaagctcaataactaccagctgacgccc
attgatgtcattagtgcgattaccgcacaaaattcacaggttgccgcaggtcagttgggt
ggctctcccccggttcctggccagcagttaaacgcgtcaattattgctcaaacccgtctg
acgtcgaccgatgaattcggcaaaatcctgcttaaagttaacgctgatggttcgcgagtt
ctgctgaaagatattgcaaaaattgagctgggaggtgagaactacgaggtcattgcacga
tacaacggcaaacctgcttccggtattggtattaaactggcaacaggtgccaacgcgctg
gatactgcggatgcggtaaaggcacagctggccaaacttgagccgttctttccatcgggc
cttaaggttgtttatccctacgacaccacgccatttgttaaaatttcaattatggaagtg
gtgaaaaccctgctcgaggcaatcgtgctggtgtttatcgttatgtacctctttttgcaa
aattttcgtgccacccttatccccacaatagcggtgcccgttgtgctgcttgggacgttc
gccattatcagtgcctttggctattcgataaatacgctgacaatgttcggcatggtgttg
gcaataggattattggttgatgatgcaattgtggtggtggaaaacgttgagcgcgtaatg
gctgaggaaggtctgccgccaaaagaagccactcgcaagtcgatggaacaaatacaaggt
gcgctggtgggtatcgctttggtactttctgccgtatttattccgatggctttcttcggg
gggtctactggggttatttatcgccagttctccattaccatcgtctccgcgatggtattg
tccgtggttgtggccatgatcctcacgcctgcgctctgcgccaccatgcttaagccaatc
agcaaaggtgaacatggcaaaacgaccggcttcttcggatggtttaaccgcatgtttgac
aagagcactcatcactatactgacagcgtagaccatattattcgcagcactggccgctat
ctggtgatctatctggtgatagtgctgggcatggcatggctgtttataaaattgccttca
gccttcctgccagaagaggatcaagggctgctactggcacaggctcagttacctgcgggt
gcaacacaggagcgcactcaggctgtgttgaacaaggtcaccgattacttcctgacaaat
gaaaaagacaatgtgaagtcagtttttaccgtgaatggctttggttttgccggtcgtggt
caaaatacgggaattgcctttgtcagcctcaagccatggagtgagcgtagcggtgcagcc
aataaagttgacggtattgcaggtcgcgccatgagagcatttggtgccattaaagacggt
atggtcattcccttcaacctgcctgccattattgagctgggcaatgccacgggttttgac
tttcagcttattgaccaggctaacttaggccatgatgccttgactcaggcacgtaatcag
ctttttggtatgatcgctcaacatcccgatacgctggtgggcgtcaggccaaatggcctg
gaggatactccacagtacaaattggccattgatcaggagaaagcagaagcacttggcgta
tcaatttctgacatcaataccacgcttggcgctgcctggggcggttcctacgtcaatgac
ttcatcgatcgtggtcgtgtgaagaaagtgtatgtgatgggtacggccgattcacgtatg
ctgccaaacgacattgataagtggtttgtacgcggttcgtcgggtcaaatggtgccattc
tccgcgtttgcttcggctaaatggcaatacggctcacctcgtctggaacgttacaacggc
ctgccatcgatggaactgcttggccaggctgcacctggcaaaagctccggtgaagcgatg
gcgctaatggaacaactggcatccaaattaccgcaagggattggctatgactggacgggg
atgtcttatcaggaacgtctgtccggtaatcaggcgccggcactgtatgcgatctcattg
attgtggtgtttctttgcctggccgcgctgtacgaaagctggtcaattccctttgcggta
atgcttgttgtccccctgggggttatcggggcgcttatcttcaccactcttcgtgggttg
agcaatgacgtctactttgttgttggcctgctgacaactattgggttgtcagcaaagaat
gccatcctgatcgtggaattcgccaaggatcttatggagaaagaaggtaaaggccttgtg
gaatcaacccttgaagcggtgcgtatgcgtttacgcccgattctgatgacctcacttgct
ttcattcttggcgtgcttccgctgactatcagtacaggcgcaggttccggtgcgcaaaac
gcggtgggaacaggtgtcatgggcggcatggttaccgcgacggtactggcaattttcttt
gtcccggtattttttgtagtggtacgcagacgctttggcaagaacaaaggatga
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