Edwardsiella tarda EIB202: ETAE_2315
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Entry
ETAE_2315 CDS
T01121
Name
(GenBank) DNA or RNA helicases of superfamily II
KO
K19789
DNA repair protein RadD
Organism
etr
Edwardsiella tarda EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etr03400
]
ETAE_2315
DNA repair and recombination proteins [BR:
etr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
ETAE_2315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
zinc_ribbon_2
AAA_30
SLFN-g3_helicase
AAA_22
UPF0547
AAA_16
AAA
QslA
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
ACY85150
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All DBs
Position
2432346..2434106
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AA seq
586 aa
AA seq
DB search
MAFTLRPYQREAVDATLAHFRRHREPALIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYQAWGLEADIYAAGLKQKGSQAKVVFGSVQSVARNLSDFDAAFSLLIVDECH
RIGDSEEGQYQQILQHLRGHNPQLRLLGLTATPYRLGKGWIYRYHYHGMVRGDEACLFQD
CIYELPLRYMIRHGFLVPPERLDMPVVQYDFSRLQPSEAGLFSAEDLNRELRDQQRITPH
IVSQIEEYAATRRGVMIFAATVEHAQEVLGLLPTGCAALISAQTPHDDRDAIIRDFKAQR
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLCDGKQDCLILDYAGNP
HDLYTPEVGSRKPHGDSQPVQVFCPACGFANTFWGKCDEQGRIVEHYGRRCQGYFEDDEG
QREQCDYRFRFKNCPQCNAENDIAARRCHQCAALLVDADDMLKAALRLKDALVLRCGGMQ
LRCGEDAKGEWLQITYYDEDGADVSERFRLTTPAQRTAFAQLFLRPHQRAPGCELIWQRA
ADIVAQRDALRAPDFVVARRRGQFWQVRQKVFDYQGRFRKANQLRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcctttaccctgcggccgtaccagcgtgaggccgtcgatgccacgctggcccacttc
cgacgtcaccgagagccggcgctgatcgtgctgccgaccggcgccgggaaaagcctggtg
atcgccgaactggcccgcctggcgcgcggacgagtcctggtgctggcccacgttaaagag
ctggtggcccaaaaccatgcgaaataccaggcctgggggcttgaggccgacatttatgcc
gccgggctgaagcaaaagggcagccaggccaaagtggtctttggcagcgtccagtcggtc
gcccgcaatctctccgacttcgatgccgccttctccctgctgatcgtcgatgagtgtcac
cgcatcggcgatagcgaggagggacagtaccaacagatactgcagcatctgcgcggccat
aacccacagctgcggctactcgggctcaccgcgaccccctaccgcctcggtaagggctgg
atctaccgctaccactatcacggcatggtgcgcggcgacgaggcgtgtctgtttcaggac
tgcatctacgagctgccgctgcgctatatgatccgccatggctttctggtgccgccggag
cggctggacatgccggtggtacagtacgacttcagccgtctgcagccgtcggaggccggg
ctcttcagcgccgaggatctcaatagagagctgcgcgatcagcagcgcattacgccgcac
atcgtcagccagatcgaggagtatgcggccacccggcgcggcgtgatgatcttcgccgcc
accgtcgaacacgcccaggaggtactgggcctgctgccgacgggctgcgcggcgctgatc
agtgcgcagacgccccatgacgatcgtgacgcgatcatccgcgatttcaaggcgcagcgg
ctgcgctacctggtcaatgtggcggtgctcaccaccggctttgacgcgccgcacgtggat
ctgatcgctatcctgcggccgacggagtccgtcagtctataccagcagatcgtcgggcgc
ggcctgcgcctgtgcgacggcaaacaggactgtctgatcctcgattacgccggtaaccca
cacgatctctatacgcccgaagtcggcagccgcaagccccacggcgacagccagccggta
caggtgttctgccccgcctgtggctttgccaataccttctggggcaagtgtgacgagcag
ggccgtatcgtcgagcactacgggcggcgctgccagggttatttcgaagacgacgaaggg
caacgcgagcagtgcgactatcgattccgctttaaaaactgcccgcagtgcaatgcggaa
aacgatatcgccgcccgccgctgccatcagtgcgccgcgctgctggtcgacgctgacgat
atgctgaaggcggcgctgaggctgaaagatgcgctggtgctacgctgcggcggcatgcag
ctgcgctgcggggaggatgccaagggcgagtggctgcagatcacctactacgacgaggac
ggtgccgacgtcagcgagcgcttccgcctgaccaccccggcccagcgcaccgcctttgcc
cagctctttctccgcccgcaccagcgggcgccgggctgtgagctgatctggcagcgggcg
gccgatatcgtggcgcagcgggatgccctgcgcgcacccgactttgtggtggcgcgccgc
cggggccaattctggcaggttcggcaaaaagtatttgactatcaggggcgttttcgcaag
gcgaaccagctgcgcggctaa
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