Escherichia coli UMNK88 (ETEC, porcine): UMNK88_92
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Entry
UMNK88_92 CDS
T02001
Name
(GenBank) D-alanine--D-alanine ligase DdlB
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun00470
D-Amino acid metabolism
eun00550
Peptidoglycan biosynthesis
eun01100
Metabolic pathways
eun01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
UMNK88_92
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
UMNK88_92
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
UMNK88_92
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eun01011
]
UMNK88_92
Enzymes [BR:
eun01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
UMNK88_92
Peptidoglycan biosynthesis and degradation proteins [BR:
eun01011
]
Precursor biosynthesis
Amino acid ligase
UMNK88_92
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATPgrasp_YheCD
TTL
ATPgrasp_ST
GARS_A
ATP-grasp_3
RimK
Motif
Other DBs
NCBI-ProteinID:
AEE54758
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Position
104225..105145
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AA seq
306 aa
AA seq
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MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFI
ALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRA
EFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIE
KWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLSDETQYFCPAGLEASQEANLQAL
VLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaatcgcggtcctgttgggcgggacttccgctgagcgggaagtttctctg
aattctggcgcagcggtgttagccgggctgcgtgaaggcggtattgatgcgtatcctgtc
gacccgaaagaagtcgacgtgacgcaactgaagtcgatgggttttcagaaagtgtttatc
gcgctacacggtcgcggcggtgaagatggtacgctgcagggcatgctcgagctgatgggc
ttgccttataccggcagcggagtgatggcatctgcgctttcaatggataaactacgcagc
aaactgctgtggcaaggtgccggtttaccggtcgcgccgtgggtagcgttaacccgcgca
gagtttgaaaaaggcctgagcgataagcagttagcagaaatttctgctctgggtttgccg
gttatcgttaagccgagccgcgaaggttccagtgtgggaatgtcaaaagtagtagcagaa
aatgctctacaagatgcattaagattggcatttcagcacgatgaagaagtattgattgaa
aaatggctaagtgggccggagttcacggttgcgatactcggtgaagaaattttaccgtca
atacgtattcaaccgtccggaaccttctatgattatgaggcgaagtatctctctgatgag
acacagtatttctgccccgcaggtctggaagcgtcacaagaggccaatttgcaggcatta
gtgctgaaagcatggacgacgttaggttgcaaaggatggggacgtattgacgttatgctg
gacagcgatggacagttttatctgctggaagccaatacctcaccgggtatgaccagccac
agcctggtgccgatggcggcacgtcaggcaggtatgagcttctcgcagttggtagtacga
attctggaactggcggactaa
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