Eutrema salsugineum (saltwater cress): EUTSA_v10002540mg
Help
Entry
EUTSA_v10002540mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03082
ATP-dependent chromatin remodeling
eus03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EUTSA_v10002540mg
03083 Polycomb repressive complex
EUTSA_v10002540mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10002540mg
Enzymes [BR:
eus01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
EUTSA_v10002540mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
EUTSA_v10002540mg
HDAC complexes
Sin3A-HDAC complex
EUTSA_v10002540mg
BRAF-HDAC complex
EUTSA_v10002540mg
REST complex
EUTSA_v10002540mg
SHIP complex
EUTSA_v10002540mg
MiDAC complex
EUTSA_v10002540mg
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
EUTSA_v10002540mg
Heterochromatin formation proteins
Other heterochromatin formation proteins
EUTSA_v10002540mg
Chromatin remodeling factors
NuRD complex
EUTSA_v10002540mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
18013726
NCBI-ProteinID:
XP_006419115
UniProt:
V4MYD6
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEM
AQFHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDMFEFCQIYAGGTIDAARRL
NNKLCDISINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKYYAINVPLKDGIDDSSFNRLFRT
IISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGY
TKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENMNTKSYISSIK
VQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQRSRDKQIQRDDEYFDGD
NDNDAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccaaggacaaaatctcctacttttatgatggggacgtggggagcgtctatttt
ggtccgaatcacccaatgaaacctcacaggctttgtatgacacatcatcttatccttgca
tatggcctgcatagcaagatggaagtttatcgtccacacaaggcatatcctatcgagatg
gctcaattccattctccggactatgtggagttcctgcaacgaataaaccccgaaaatcag
aatttgtttcccaatgaaatggctagatataatctaggagaggattgtcctgtctttgag
gatatgtttgaattttgtcaaatctatgccggtggaaccatagatgctgcacgcagatta
aacaacaaactctgtgacatttctataaattgggctggtgggttgcaccatgccaaaaag
tgtgatgcatctgggttttgttacatcaacgatctcgtactaggaattcttgagctgttg
aaacaccatccccgtgtgctatacatagatatagatgttcatcatggtgatggagttgaa
gaagctttttactttactgacagagtgatgactgttagctttcataagtttggagataag
ttctttccagggaccggggatgttaaggaaataggagaaagagaagggaagtattacgcc
ataaatgtgccattgaaggatggtattgatgacagtagtttcaaccgtttgttcaggaca
ataatttccaaggttgttgagatatatcaaccaggagcaattgttcttcagtgtggagca
gattcacttgcaagggatcgactaggatgctttaatctctctattgatggacatgctgaa
tgtgttaaatttgtgaagaaattcaaccttcccttgctggttactggaggtggaggatac
acaaaggagaatgtagctcggtgttggaccgttgaaactggcattcttttggacacagaa
cttcctaatgagattcctgaaaacgactacattaagtattttgcgccggatttttcattg
aagattcctggtggtcacattgagaatatgaataccaaatcgtatatcagttcgatcaaa
gtacagattttggagaatttgcggtacattcaacacgctccaagcgtgcaaatgcaggag
gttccaccggatttctacataccggattttgatgaagatgaacaaaatccagatgaacgt
gtggaccagcgttctcgggataagcagattcaaagagacgatgaatatttcgatggggac
aacgataatgatgcgtcgtaa
DBGET
integrated database retrieval system