Eutrema salsugineum (saltwater cress): EUTSA_v10007455mg
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Entry
EUTSA_v10007455mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
eus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10007455mg
03015 mRNA surveillance pathway
EUTSA_v10007455mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10007455mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
EUTSA_v10007455mg
mRNA cycle factors
P-body specific factors
EUTSA_v10007455mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
18991671
NCBI-ProteinID:
XP_006415052
UniProt:
V4K718
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MKDPSPKRKVVVRHLPPSLSQSDLLSQIEPRFGDRYYWFSFRPGKSSYKNQKFSRAYVGF
KAPEDVYEFAAFFNGHVFVNEKGAQFKAVVEYAPSQRVPKPCDKKDPREGSISKDPDYLE
FLKLIAQPVENLPSAEIQLERREAEQSGAAKPAPIVTPLMEFIRQKRATVTGSQQQGILD
VRRGGRRARAVSANKPSSRPSKRNSEKKKYVEKDTSKSLLRKATSDIGGSKQDIHQPNSS
GKDIPATETVNQSAAIASVMDSSLPGIALTMDSGKKKILLLKSKDRDNPGNTPPQPEQQM
ETNLSGSSSASRQNQKSDLGGRLIKGILQKNELRPSQSSSFVQSEQRVEPSEAENFKRPP
RPANTRAGKDYHVSGTNSEKQERRTRNKDRPDRVVWAPLRRGDGSSEDQPSTSAANNGEV
KERILLQRSGELVNSSGGHSLENGSARHSSRRVGARNRKEDGFGVTGEGKPSRRGGGGGP
NSQEKQMWIQKSSTGT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacccgtcaccgaagaggaaggtggttgtacggcacttaccgccttcgctttct
cagtccgatctcttatcccaaatcgagcctcgtttcggtgatcgttactattggttttcc
tttcgtcctgggaagtccagctataagaatcagaagttttcacgggcctacgtcggtttc
aaggcaccagaagatgtttatgagttcgctgcatttttcaacgggcatgtgtttgttaat
gaaaagggtgctcagttcaaggccgtagttgaatacgcaccttcacagcgtgtgccgaaa
ccatgtgacaagaaagatcctcgtgaagggtctattagcaaagaccctgactatctggag
ttccttaagctaattgctcaacctgttgagaatcttcccagtgctgaaatccagttggaa
agaagagaagctgagcagtctggcgctgcaaaaccggctcccattgttacccctcttatg
gaatttatacgtcaaaaacgtgctactgtgactggatcccagcaacagggcatattagat
gttcgaagaggaggtagaagagccagagcggtctctgcaaacaagccaagttcaaggccc
tcgaaacgaaattctgaaaagaaaaagtatgtggaaaaagacacttcaaaaagccttctt
cggaaggctacatcagacattggtggctccaagcaagatattcatcagccaaattcaagt
ggaaaggacataccagcaactgaaaccgttaatcaatcagctgctatagcctctgtcatg
gatagctctctcccaggaattgcattgactatggattctgggaagaaaaagattttactc
ctgaaatcgaaagacagagacaatcctggtaacactccaccacaaccggaacagcagatg
gaaactaatctttccggaagctcctcagcttcaagacagaatcagaagagtgatcttggt
ggaaggttgatcaagggaatacttcagaagaatgagctgcgaccaagccagtcttcatct
tttgtccagtctgagcaaagagtggaaccctcagaagcagaaaactttaagcgacctcct
cggccagccaacactcgagcagggaaagactatcatgtttctggtaccaatagtgagaag
caagagaggcgtacaagaaacaaggacagacctgatcgtgttgtgtgggctcctcttcgt
cgtggtgatgggtctagcgaggatcaaccgtcaacttcagcagcaaacaatggagaagtg
aaagagaggatattattgcaaagatctggagaattggtgaactcctctggtgggcactct
cttgagaatggttctgctagacattctagtcgccgtgttggagctcgcaatagaaaagaa
gacgggtttggggtgactggtgagggtaaaccatcccggagaggaggtggtggtggtcct
aattcacaggagaagcaaatgtggatccagaaatcatccacgggtacttga
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integrated database retrieval system
