Eutrema salsugineum (saltwater cress): EUTSA_v10012411mg
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Entry
EUTSA_v10012411mg CDS
T02985
Name
(RefSeq) hypothetical protein
Organism
eus
Eutrema salsugineum (saltwater cress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRT6_C
zf-UBR
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
18018345
NCBI-ProteinID:
XP_006398694
UniProt:
V4LCN7
LinkDB
All DBs
Position
Unknown
AA seq
1905 aa
AA seq
DB search
METDSPLFGSFPPSSHDLLLERLACVGVPKESCSKRGLLEFVTANKSRISELVSALLPTD
EDVKLGLKEARERSRKSAVSPSMKKRFRESMNWLQWLMFQDEPGVSLRTLAKLNVDQRGV
CGSVWGLNDIAYRCRTCENDPTCAICVPCFQNGNHETHDYSIIYTGGGCCDCGDETAWKR
EGFCSKHKGSEQIQPLSQDLANSVGPVLDALFACWSNKLLSAESIGQNNARSNDTLVVVQ
KISNELTFVVVEMLLEFCNSSESLLSFVSRRIITSSSLLDTLIKAERFLDQNVMKKLHDL
FLKLIGDPVFKSEFAKAFVSYYPVVISEAVKQGTDDAFKKYPLLNLFSVQILTVPTLTPF
LVKEMNLLAMLLGCLGDIFRSCSGEDGVLQAAKWERLCETSERVIGDLKFVTSHAVVSKY
ATHEQRELSRLWLILLTFAQGMNPLKRETGIHIEEENEYMHLFFVLGHSIAVIHSLLVNG
TYSAASDEELETERTTKVELDKCDDDGERYAKVGRLSHEDSVCTAMVSSSSFDSSMASEV
HNPHLPSSAIWLIRECLKVLETCLGDDEGISKFLCKLFSPSGRKIPGSKMLWPKRELLKV
ETGGSVSSGLASSSRDPSTGLSPLCGDIQTNLSLDNVGGPKGEVQTDVTADSRSVSCNSS
DSTKNASGVHILGLCDWPDIHYDVSSQAISVHLPLHRLLSLLIEKALRICYGESALHHGV
NASHEIPHGDFFSSVIGDFHPYGFSALVMEHVLRVRVFCAQVIAGMWKKNGDAALVSCEW
YRSARWSEQGLELDLFLLQCCGALAPADSYVNKLLSRFGLSSYLSLNPGRTNEYEPILVK
EMLALLIQILQERRFCGLSTAESLRREIIFKLATGDFTHSQLVKSLPRDLSKSDELQEVL
DNVSIYSNPSGMNQGKYSLRSSCWKELDLYHPRWHSRELQSAEERFSRYCGVSALTTQLP
RWRMIYPPLKGLARIGTCKATFQIISSALYYALQSGTSGESRASYDVLITALHLLSLSLD
ICTQQRESNIQASVENSIPILELAGLEIIGKDSGTGKQSLLSLLMSLMKTRKDDGLQQFP
EAGSCNISSWIGNLLRKFSAIDSVCMNLLQSLAPEVVDQSGFDKVTSGSASDEKRKAKAR
ERQAAILAKMKAEQSKFLSTLSSSMDDDDPKSETETSDSLMEHDSEIAVREVCSLCRDPD
SKAPVSFLIFLQKSKLLSFVDRGPPSWDHGPQSEKKISVDGTPDRLRMNDSLRMSPPPHV
LELSEDATSEPATDSVLGSLKARLIGNGQTEKRSTDGRGKEEFNMESLEIAMYQTVRKNV
ENKNLTRVDHQQLDAESSSERNSVGGPSTLLVSFHDIQSRQTSRHLDVGSDGFHPNDCDG
VYLSSCGHAVHQSCLERYLKSLRERSGRRNVFEGAHIVDLDQGEFLCPACRRLANSVLPA
CPGDLCSVSKLQESPRANLGTSDAQKPSFRLSEALCLLRSAAEEIEYGDSIKTVSLQRVE
LRRKDLESVSNKLWNFYFSKRQEKSPESPWLPQSIVMWDTLKYSLISMEIVARCAKNSML
PVYSIDSLYEEFKSSKGTVLSLLLRVVQSTRTKNGLHVRQRFMGMKNLAESICSGISSSS
SSSIFGSEGTGGSLKNINLLWNRASDPVLAHDPFSSLMWALFCLPFPFITCEESLLSLVH
VFYSVSLVQTAIAYCAGRLCDLSELDFEESLLSDISIAVRESGGWGYYRSNKMDLSCDIK
ETIRKCSLPFLRRCALLWRLLKTTPGKFHEEVDMFVVPSDSGSDNMDLMYSPQSELNHVH
ELEKVFEIPPIETILSDELLRSSTQTWLRHFQKEYRVKGPLSITPGVPFQLMKLPNLYQE
LLQRYIKKPCSNCTKVIEEPALCLLCGRLCSPIWRPCCRYLRHFH
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgactcgcctctttttggctcatttcctcccagctcgcatgatttgctactc
gagaggcttgcatgtgtgggggttcctaaagaaagctgctctaaacgtggtctattggaa
ttcgttacagctaacaagtccaggatttcagagttagtctctgctctcttacctacagat
gaggatgttaaactaggattgaaggaagctagggaacggtctcgaaagtctgctgtgagt
cctagcatgaaaaagaggttcagggagagcatgaattggctgcagtggttgatgttccaa
gatgagcctggtgtttctttgaggactctagcaaaattgaatgttgatcagcgaggtgtt
tgtggctctgtttggggactcaatgatatagcatataggtgtaggacatgcgagaacgat
ccaacttgtgcaatctgtgtgccttgtttccagaatgggaaccacgaaacccatgattat
tcgattatttatacaggcggtggttgttgtgattgtggggacgagacagcatggaaacgg
gagggtttctgttcaaagcataaaggttcagagcagattcaacccctctcacaagatcta
gcaaattcagttgggcctgtacttgatgccctttttgcttgttggagtaacaagctctta
tctgcagaaagtattggtcagaataatgctagatccaacgatactcttgtagtagtccaa
aagatatcaaacgaactgacatttgtagtggttgaaatgcttctggaattttgtaactcc
agtgagagtttgctcagttttgtttctagaaggattatcacttcaagtagtctattggat
actctcataaaggctgagaggttcttggaccaaaatgttatgaagaaactacatgacctg
ttcctcaaattaataggagatccagtctttaagtcagaattcgcaaaagcatttgtgagt
tactatccggttgtcataagtgaagcggttaagcagggcactgatgatgcattcaagaaa
tatcctctactgaacctattttctgtgcaaatcctcacggtgccaactttaacaccattt
ctggtgaaggaaatgaatttgctagctatgcttttgggatgcctcggtgatatctttcgt
tcttgttctggggaggatggtgtgctacaggctgcaaagtgggaacggttgtgtgagaca
agtgagcgtgtcattggggacttaaaatttgttacgagccatgctgtagtttctaagtat
gcaacacatgaacaacgggagttatcaagattatggttgatacttttgaccttcgctcaa
ggaatgaatcctctaaaaagagagactggaatccatattgaagaagagaatgagtacatg
catttgttctttgtcttgggtcattcaatagctgttattcactccctgttggttaatggt
acatattctgctgccagtgatgaagaactagaaactgagagaaccaccaaggtagaactt
gataagtgtgatgacgatggagaaagatatgcgaaagttgggaggttgtctcatgaagat
tcggtatgtactgcgatggtaagtagcagttcctttgatagctcgatggcctctgaagta
cacaatccccaccttccttcttctgccatatggttgatacgcgaatgtttgaaagttctg
gagacttgcttaggagatgatgaaggtatatcaaagtttctttgcaagttgttttctcct
agcggcagaaagattcctggcagcaagatgctgtggccaaagagagaattgttaaaggtt
gaaactggaggaagtgtatctagtggtcttgccagttctagtagagatccgagtactggc
ttatcccctctatgcggcgatatacaaacaaatcttagcttggataatgttggtggaccg
aaaggagaggttcagacagacgttacggctgactctaggagcgtatcttgcaactcttcc
gattcgacaaagaatgcatcaggagtccatatacttggtctatgtgattggccggacatc
cactatgatgtgagctctcaggccatatcagttcatctaccgttacaccggttgctttct
ttactcatagaaaaagctttaaggatatgttatggagaatctgcattgcaccatggagtc
aatgctagtcatgagatcccgcatggagacttcttcagctctgtgataggagattttcat
ccttatggattttctgcgcttgttatggagcatgttctccgggttagggtgttctgtgcc
caagttatcgctggtatgtggaagaagaatggggacgctgcattagtatcttgtgagtgg
tatcggtcggctcgttggtcagaacagggacttgagcttgatctatttcttctgcaatgt
tgtggtgcgttggctccggcagattcttatgttaataagcttctcagccgatttgggctc
tcgagctatctttcactaaacccgggtagaacaaacgagtatgaaccaattttggtcaag
gaaatgcttgctcttctgatacagattctgcaagaaaggcgattttgtggtctttctact
gctgaaagtttgagaagagagatcatcttcaagttagccactggagatttcactcatagt
caattggtcaaatccttaccccgtgacctgtcaaagtcggatgagctccaggaggtctta
gacaatgtttcaatctattctaatccatccggaatgaaccagggaaagtattctctacgg
tcatcttgttggaaggagttggatctctaccatcctcgttggcattcgagagaattgcaa
tctgcagaagaaagattttcacgctattgtggagtgtcagcgttgaccactcagcttcct
aggtggaggatgatctatccgcctctaaaggggcttgctagaataggcacttgcaaagcc
acatttcaaatcatttcctctgctttatactatgcactacagagtggtacatctggagaa
tcacgtgcttcatatgacgttctcataactgcactgcacttactctcgttatcattggat
atatgcactcagcagagggaatctaatattcaggctagtgtagaaaattcaattccaatt
ctcgaattagctggtctggaaataattggtaaagattcggggactggaaaacaaagtttg
ttgtctcttcttatgtcgttaatgaagactcgtaaagatgatggtctccagcaatttcca
gaggcaggcagttgcaatatttcgtcctggattggaaatctgctgaggaagttcagtgca
attgattctgtttgtatgaacctattgcaaagtcttgccccagaggtggtcgatcaatct
ggttttgataaagtcacgtcgggctctgcttctgatgagaaacgcaaggctaaagctaga
gagaggcaggctgctattctggcaaaaatgaaagctgaacaatctaaattcttgtctacc
ttgagttcgagcatggatgatgatgatccaaaatctgaaaccgaaacaagtgattctctg
atggaacatgattcagaaattgctgtccgtgaagtttgctccctctgccgtgacccagat
tccaaagcccccgtttctttcttgatttttctccagaaatcaaaacttttgagttttgtg
gatagaggccctccatcttgggatcatggtccacagtccgaaaagaaaatatctgtggat
ggaactcccgatcgtttaagaatgaatgatagtttaagaatgagtcctcctccccatgtg
ctggagttgtcagaagatgcaacctctgagcctgctacagactctgtgcttggatcttta
aaagcccggcttataggtaatggtcagacagagaagagatctaccgatgggaggggaaaa
gaggaatttaacatggaatctttggagatagctatgtatcaaactgtccgtaaaaacgtt
gaaaacaaaaaccttacacgtgtagatcatcaacagcttgatgctgaaagtagctccgag
agaaattctgttggtggtccatctactttgcttgtcagttttcatgatattcaatcaaga
cagacctctagacatcttgatgttggttctgatgggtttcaccctaacgactgtgatggg
gtttatctttcatcatgtggacatgctgtgcatcaaagctgtcttgaacgatatttaaaa
tcgttaagggaaaggtctggcagaagaaatgtctttgaaggtgcacatattgtggatcta
gaccagggggaatttctctgtcctgcatgccgccgactagctaattctgtattgcctgca
tgtcctggagatttatgttctgtctcaaagctacaagaaagtccgcgtgctaatttaggt
acttcagatgcacagaagccttcttttaggctctctgaagcattgtgtctactacgatct
gctgctgaagagatcgaatatggtgatagcatcaaaacagtttctctgcaacgagttgaa
ttaagaaggaaggatcttgaatctgtatctaacaagctctggaatttctatttttccaag
cgacaggaaaaatctccggaaagtccatggctaccacaatcaatcgtcatgtgggacact
cttaagtactctcttatttcaatggaaattgttgctcgttgtgcgaagaattcgatgctt
cctgtctattctatagactctttgtatgaagagtttaaaagctctaagggaactgttttg
tcactcttattacgagtggtacagagtacccgaacaaagaatggtttacatgttcgccag
agatttatgggtatgaagaatcttgcagagtctatatgctcaggaatttcaagtagttct
tcgagcagcatatttggaagtgaaggcacaggaggttcattgaagaatataaacctgctc
tggaatcgagcatctgatccagttcttgctcatgacccattttcatcactgatgtgggct
ctcttttgtctcccttttccttttatcacatgcgaggaatctctattatcacttgtgcat
gttttctacagtgtctctcttgttcagactgcaattgcctattgtgcaggtcgcctatgt
gacttgagcgagttagatttcgaggaaagcctgctgagcgacatctccatcgctgtgaga
gaatcaggtggttgggggtattacaggtctaacaaaatggatttatcatgtgatataaaa
gagacaatccgtaaatgtagtcttcctttcttgaggagatgtgcattgttgtggaggcta
ctgaaaactactcctgggaagtttcatgaagaggtagatatgtttgttgtgccatctgac
tccggcagcgacaatatggatttaatgtatagtccccaatccgagctgaatcatgtgcat
gaattggagaaagtgttcgagattccgcctattgagaccattctcagtgatgaacttctc
cggtcttcaacccaaacatggcttcgacattttcagaaggaatacagagttaaagggccc
ctttcgataacccctggagttcctttccagcttatgaaactacccaatttataccaagaa
ctactgcaaaggtatatcaaaaaaccttgcagcaactgcacaaaagtgatcgaagaacca
gcattatgtcttctttgtggaagattgtgttctcccatatggagaccttgttgcaggtat
ttgcgtcacttccactag
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