Eutrema salsugineum (saltwater cress): EUTSA_v10013039mg
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Entry
EUTSA_v10013039mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10013039mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10013039mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
Helicases
EUTSA_v10013039mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
18018363
NCBI-ProteinID:
XP_006399006
UniProt:
V4L9V5
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MDSSPTTNKALTGTRFSDLEPPLSEDIIEVLEKSGFEFCTPVQAATIPLLCRHKDVAVDA
ATGSGKTLAFLLPLIEILRRSTSYPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLPNV
NSVLLVGGREVKADMKTIEEEGGNLLIGTPGRLSDIMERMEILDFRNLEILVLDEADRLL
EMGFQKQVNSIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESKSEPSQQL
TNSKIPSGLHLEYLECEADKKSSQLVDLLIKNENKKLIVYFMTCASVDYWGLVLSKIPAL
KSISLIPIHGDMKQNARDKALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPN
MFNHRVGRTARLGRQGRAIVFLLPKEEDYVEFMRRRGVSCQERKCSEEASDVIPIIRSLA
MKDRAVLEKGLKAFVSFVRAYKEHHCSYIFRWKGLEIGKLAMGYGLLYLPSMSEVKQHRL
SSEGFTPVEGVKFEDIKFKDKSREKQRKQNLQARKEKRQEEKREKGKKFSKKAVDASATT
DSNKASRKLTGKQRQTIQTAEDEEEMARDYRFLKKLKKGSIKEDEFAKLTGADDF
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcgccgaccactaacaaagctttaacggggacgcgtttctccgacctcgaa
cctccgctctccgaagatatcatcgaggtgcttgaaaagtccggtttcgagttctgcact
ccggttcaggccgcgacgatccctttactctgccgccacaaggatgttgccgtcgacgct
gccaccggttctggaaaaaccctagctttcctcctccctctcatagagattctccgtcga
tccacctcctaccctccgaagcctcaccaggttatgggggtgataatatcgccaacaaga
gagctatcaacgcagatatataacgtggcacagccgtttgtttcgactttgcctaatgtg
aactctgtgctgcttgttggaggccgagaggtgaaagctgacatgaagactattgaagag
gaaggaggcaatctcttgattggcacgcctggaaggctctctgatataatggaacgaatg
gagattctggatttcagaaatcttgagattcttgtcttagatgaggcagacaggcttttg
gagatgggattccaaaagcaggtgaatagcattatatctcgcttgccaaagcaacggagg
actggcctcttttcagctacacaaacagaaggcgttgaagagctggccaaggctgggctt
aggaatcctgtgagagttgaagttcgagctgagtcgaagtcggaaccatcccagcagtta
acaaactcgaaaataccttctggtctgcaccttgagtatttggaatgcgaagcagataag
aaatcatcacaactagtagatctcctcatcaagaatgaaaataaaaagcttatagtatac
tttatgacctgtgcttccgttgattactggggactcgtactttcaaaaattcctgccctg
aagtcgatatctttaatccccatccatggggatatgaagcagaatgcaagagacaaggca
ttagcttcgtttactgaagcatcaagcggtgtccttttgtgcacagatgtcgctgcacgt
ggacttgatattccaggcattgattacgtagttcagtatgatcccccacaagacccaaat
atgttcaaccatagggtcggcagaactgcaagattgggaagacaagggagggccattgtt
tttttactgcccaaggaagaagactatgtagagtttatgcgcagaagaggggtctcttgt
caagagagaaaatgctctgaggaagcatctgacgtcatcccgattatacgttcactagcc
atgaaggaccgggcagtgttggagaagggattaaaggcatttgtttcctttgtccgtgct
tataaggagcatcactgctcttatattttcagatggaaaggccttgaaatcggaaagtta
gcaatggggtatggcctcttgtatcttccttcaatgtctgaagttaaacaacacagactt
tccagtgagggtttcacacccgttgaaggcgtcaagtttgaggacataaaattcaaggac
aaatctcgggagaaacaaagaaagcaaaacttacaagcaaggaaagagaaacggcaagaa
gagaaaagagagaaaggcaagaaattctcgaaaaaggcggttgatgcttccgctacaact
gattcgaacaaagcgtcgagaaagttaacaggaaaacagagacaaaccatccaaacagcc
gaagatgaagaagaaatggctcgagattatcggtttctgaaaaagctgaagaaagggtca
attaaagaagatgaatttgcaaaacttacaggagctgatgatttttaa
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