Eutrema salsugineum (saltwater cress): EUTSA_v10024179mg Help Entry EUTSA_v10024179mg CDS       T02985                                  Name (RefSeq) hypothetical protein   KO K19026   spatacsin Organism eus  Eutrema salsugineum (saltwater cress) Brite KEGG Orthology (KO) [BR:eus00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:eus03400]     EUTSA_v10024179mg DNA repair and recombination proteins [BR:eus03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      EUTSA_v10024179mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  18029040 NCBI-ProteinID:  XP_006411745 UniProt:  V4MKI1 LinkDB All DBs Position Unknown AA seq 3185 aa AA seqDB search MERLLNEAPTLLQLHKWEPSQLPLKLSEFRESFISPSRQLLLLLSHHSEAALLPLVSGSS IGSEVSVSCNNEEANSPTFSPSPLYNSTASSESDPENIASPSGSGVGPGEPGFVDNCSTS CNSFPFIFDAKSVAWGSCGDTYNLHKDPLFRELLFVSGNRGVTVHAFCSFKDNTSDRAKD KPNGELRHGKWVEWGPSTLNQKSEHERVSSFNGTKKWMQSFLIDVVTTEIEGTKQSRFPE KSAFPASAEVVSFSILDINLPFSNLLFQDNSILQKDNMPEEGNVSGDSFLVASDPTALDE KSRADMPINNASINSLYRCTKVFSSDSHFLIGFVMELSDCVSTPTSNENDRSKDKSVVFV AQLFSWGMEWVSLVKFGESSSGPTNEWADFRLSDKFVICLSVSGLIFLYDVKSGDCFAHQ DILQTGRGLHSSSVMQEATGEADQRSYFQSLIPSMSKARIVGSVDRRKFRKLIVASHTPL LAAVDENGLVYVLCVDDFVTKEYHMSVESIPYLCHFGLGSLVGWKIGGMDVGQQKVHHAN SSGSRGEDAFSRCDPCLERQHNNFDRRAGYSGSWLSGFSAQPKTNVPRVENFQRDLHVTR KMFLSTEKLGLDDNICFSPLGFTHFSRKHTKKEDQSCKVFHYSLQTHMTARDDSYLKYDD NKISIQDAQETFVGESVGCSFQGFLYLVTCSGLSVYLPSISITSNYPTVEAIGYLQPLQT SVIGCQGIENLRTGELRFPWQVEVIDRVILFEGPEAADRLCLENGWDLKLARLRRLKMAL DYLKYDDINESLKMLSNVKLAEEGMLRVLFSALYLLSRKNRNDNEISAVSRLLALATGFA TEMIRIYGLLEYQKDGYILDSKYRTQILSLPPISIHSDVMENSRRLSEMGYLLEVTRNFQ SRIYRKFKNLGKGKNEKSVNLVDPNSLHDDSQLEVVPDAASAESRQLDTYVINTSEELAL TPMATMTAKAGQVIDEISYASGLVPQGVIAEKKVLPLENPKEMMARWKTNNLDLKTVVKD ALLSGRLPLAVLQLHLQHSKDSVENGEHHDTFTEVRDIGRSIAYDLFLKGEPGVAIATLQ RLGEDVEACLNQLVFGTVRRSLRYQIAEEMRKHGFLRPYEDNVLERISLIERLYPSSHFW ETYLTRRKELLKAEVPFDSSKISLHLGGTSLFQHLEIGCGEVDGVVIGSWTKINESASEH APDETDATAGYWAAAAVWSNAWDQRTFDHIVLDQPLVMGVHVPWDSQLEYFMCHNDWDEV LKLLDLIPEDLLYDGSLQIALDGPKQSSGVNYSISSRSEFICSIEEVDAVLMEVPYIKIF RLPADIRCSLWLTTLMEQELARKLIFLKEYWENALDVVYLLAGAGVILSNCEVSFKVESC RPSLDLCLSRKERGANVDTLNAVHKLFIHYCTQYNLPNLLDLYLDHHDLVLDNDSLSSLQ EAVGDSHWAKWLLLTRIKGREYDASFSNARSIMSRGAAPNGELSVAEIDEIVCTVDDIAE GAGEMAALATMMCAPVPIQKSLSTGSVNRHSNSSAQCTLENLRSFLQRFPTLWSKLVTAC IGEDISGNLLRTKAKNVLSEYLNWRDSVFFSAARDTSLLQMLPCWFPKAVRRLVQLYIQG PLGWLSFSGYPTGEYLLHRGVEFFINVDDPTEISAISWEAIIQKHIEEELHNTKTEGAEL GLEHFLHRGRPLAAFNAFLEHRVEKLKLEDQSGSSTHRQRNMQSDVPMLLAPLTQTDESL LSSAIPLAITHFKDSVLVASCAFLLELCGLSASMLRIDVASLRRISSFYESNDNADMAQQ KLLKGSLFHAVSSEGDLMGSLARALANEYAYPDISSVSKQKHTPNSNSGAQPCLPLMLVL HHLEQASLPDIGVDRKTSGYWLLTGDGDGSELRSQQTSASLHWSLVTLFCQMHKIPLSTK YLAMLARDNDWVGFLSEAQLGGYPFDTVLNVASKDFGDQRLKAHILTVLRYANSKKKATI SYSDDTSGGFTCSFSEDGSYVSAELFRVLAYSEKLKNPGGYLLSKAKELSWSILALIASC FQDVAPISCLTIWLEITAARETSSIKVNDITTKIAENIAAAVVSTNSLPTDARGVQFHYN RRNPKRRRLIAHTSEDSLASANTLNTSAGSFFSSHRTEAAEDEKAEDTGVTNDSSDEHAS LSKMVAVLCEQHLFLPLLKAFELFLPSCSLLPFFRALQAFSQMRLSEASAHLGSFWARVK DESMPFQSNTAKEVNFGASWISKTAVKAADAILSTCPSPYEKRCLLQLLAAIDFGDGGSA ATYYRRLYWKVNLAEPSLRTENDLGLGSGALDDGSLLAALEKNRQWEQARNWAKQLETIG APWTSSVHHVTETQAESMVAEWKEFLWDVPEERIALWGHCQTLFIRYSFPALQAGLFFLR HAEAVEKDLPAREIYELLLLSLQWLSGLTTLSHPVYPLHLLREIETRVWLLAVEAEAHVK NLGAFSPSSNGKDMASGNSSNLIDRTASIITKMDNHISSATKSKTGEKHDSRAPGQVHQR NQDTSTSTFGASTKPKRRAKGNVPQRRHFVDSSDRNTDFEDSSLLNIKSESQLQEESTGL EISLSKWEESIEPAELERAVLSLLEFGQVTAAKQLQLKLAPGNLPSELIILDAVMKLAML STPRSQVPLSMLEDEVRSVIQSHSLKMDQHMIEPLQVLESLSNILIEGSGRGLARKIIAV IKAANILGLTFTEAYLKQPIELLRLLSLKAQDSFEEACLLVQTHSMPAASIAQILAESFL KGLLAAHRGGYIDSQKEEGPAPLLWRFSDFLKWAELCPSEQEIGHSLMRLVITGQEIPHA CEVELLILSHHFYKSSTCLDGVDVLVALAATRVEAYVAEGDFSCLGRLITGVGNFHALNF ILNILIENGQLDLLLQKFSAAADANTGTAQAVRSFRMAVLTSLNLFNPDDHDAFAMVYKH FDMKHETAALLEARADQAAQQWFLRYDKDQNEDLLDSMRYYIEAAEVHTSIDAGNKARKA CGQASLVSLQIRMPDSKWLCLSETNARRALVDQSRFQEALIVAEAYGLNQPSEWALVLWN LMLKPELAEEFVAEFVAVLPLQASMLLELARFYRAEMAARGDQSQFSVWLTGGGLPAEWA KYMWRSFRCLLKRTRDLRLRLQLATTATGFPDMVDACMNALDKVPENAGPLVMKKGHGGG YLPLM NT seq 9558 nt NT seq  +upstreamnt  +downstreamnt atggaaaggttgttgaatgaagccccgacgctgctgcagctgcacaagtgggaaccttct caattgccactcaagctatcagaatttcgcgagtcttttatttctccatcgaggcaattg ttgttattactctctcaccactccgaagctgcactgcttcctctggtttcagggagttct attggcagcgaggtgtcggtgagttgtaataatgaagaggcgaatagtcctactttctct ccgtcccctttgtataattctacagcatctagtgagtccgatccagagaacattgcatct ccttctggatcaggagttggtcctggagagccaggttttgtagataactgcagtactagt tgcaatagttttccttttatctttgatgcaaagtctgttgcttggggtagttgtggggat acttacaacctgcacaaagatcctttgtttagggaattgttgtttgtatctggaaatcgt ggtgttacggtccatgctttttgctctttcaaagataatacaagtgacagagccaaagac aaaccaaatggtgagctgaggcatggtaagtgggttgaatggggaccttctacgctaaat cagaaatcggaacacgaaagagtctcttcttttaatggtacaaagaagtggatgcaatct tttctaattgatgtggtaactactgaaattgagggtacaaaacagtcaaggttccctgag aagtcagcgtttcctgcttctgcagaggttgtttcattcagcatattagatattaatctt cctttctcgaatctccttttccaagacaattccatacttcagaaggataatatgccggag gaaggtaatgtaagtggcgatagttttcttgtggcttctgatccgactgctttggatgaa aaatctcgagctgatatgcccattaacaatgccagtataaacagtttgtacagatgcacc aaagttttctccagcgattctcattttctgattggatttgttatggagctatcagactgt gtatctacccctactagcaatgaaaacgatagaagcaaggataagagcgttgtctttgtt gcccagctgtttagctgggggatggaatgggtctcccttgtgaaatttggggaatcaagt agtggacctacgaatgagtgggctgatttccggctatctgataaatttgttatctgcctc agtgtttctggtttgatttttctatatgatgtgaaatctggggattgttttgctcatcag gatattttacagactggtcgtggattgcattcttcatcagtcatgcaagaagcaactgga gaggctgatcagcgaagttactttcaaagtcttattccatccatgtctaaggctcgcatt gttggttcagtagacagaagaaagtttagaaagcttattgtagcttctcatacaccactg ctagctgcagttgacgaaaacggtttggtatatgtgttatgtgttgatgactttgttacc aaggaataccatatgtctgtggaatctattccttatttatgtcattttgggcttggaagc ctggttgggtggaaaatcggtggcatggacgttggccagcaaaaagtacaccacgctaat tcctctggctctcgaggtgaagatgctttttccaggtgtgatccatgtttggaaagacaa cacaacaattttgatcgaagagctggttattctggttcatggttgagtggtttttctgct cagcctaaaacaaatgtgccgagagttgaaaatttccaaagagacttacatgtcacgcgg aagatgtttctatccactgaaaaattaggattggatgataacatatgtttttctccattg ggcttcactcatttctctagaaagcacacaaaaaaggaagatcaaagctgtaaggttttt cattacagcctgcagactcatatgactgcgagagatgatagctatttaaaatacgatgac aacaagatttctattcaagatgcacaagaaactttcgtaggagaatcagttggttgctct ttccaaggatttctttatctggtgacttgtagtggtctttcagtttatcttccttccatt tcaataacctcaaattacccaactgttgaggccattggatatctgcagccactccaaacc tctgtcatcggatgccagggaatagaaaatttgagaacaggggaactacgttttccttgg caagttgaggttatagatagagttatcttgtttgaaggccctgaagctgcagatcgtttg tgcttggaaaatggttgggacctaaaacttgctcgtttgcgtcgactgaaaatggcgttg gactacttaaaatatgatgacatcaacgagtctttgaagatgcttagtaatgtgaagctg gcagaagaaggcatgctaagggtgctcttttctgctctgtatctgttgtcgcgcaagaat agaaacgataatgaaatttctgctgtatctaggctcctcgcactggctacagggtttgcg actgagatgattcgcatatatgggttacttgaatatcagaaagatggatacatcttggac agcaaatataggacacaaatactttcacttccgccaatttcaatccatagcgacgtaatg gaaaattcgaggaggctgtcagagatgggttatcttttggaggtcacccgcaattttcaa tcccgtatttacagaaagtttaagaacctaggaaagggaaagaatgaaaagtcagtgaac ctggtagacccaaattctttgcatgatgattctcaacttgaagttgttcctgatgcagca tctgcggagtcgagacaacttgacacttatgtaatcaataccagtgaagagcttgctttg actcctatggctacgatgacagccaaagctggtcaggtcattgacgaaataagttatgcg tctggccttgtaccccaaggagtgattgcagagaagaaagttcttccgttggaaaatccc aaggagatgatggctcgttggaagactaataatttagatttgaaaactgtggttaaggat gccttgctctcgggtcgactccctttagctgtccttcagttgcatcttcaacattctaaa gactcagttgagaacggagagcatcatgatacatttactgaagttcgtgatatcggaaga tctattgcctatgacctatttttgaagggtgaacctggagttgccattgcaactctgcaa aggctcggagaggatgtagaagcgtgtctcaatcagttggtatttggcacagtgagaaga tctcttcgatatcagatcgctgaagaaatgagaaaacatggttttttaagaccatacgaa gacaatgtactggaaaggatatctcttatcgagaggctatatcctagcagccacttttgg gaaacatatcttactcgtcgaaaggaactcctgaaggctgaagtaccttttgactccagt aaaatcagcttgcaccttggggggacttctttgttccagcatctcgagattgggtgtggt gaggttgatggtgttgttataggttcttggacaaaaatcaatgagagtgcatctgagcac gcccctgatgaaaccgatgcaactgctggctactgggctgcagcagctgtgtggtcaaat gcttgggatcagagaacatttgatcatatagtcttggatcagcctttagttatgggtgtt catgttccatgggattcccagttggagtattttatgtgtcacaatgattgggatgaagtc cttaagctgttggatctcattcctgaggatcttttatatgacggaagtttgcaaattgct ttagatggtccgaagcagtcttctggcgttaattattcaatttcttcccgtagcgagttt atatgctccatcgaagaagtggatgctgtacttatggaagtcccttatatcaagatattt agactacctgcagatatccggtgctccttgtggctaacaacgcttatggagcaggaactt gcaagaaaacttatatttttaaaagaatattgggagaacgctctagatgtagtctatctt ctggctggggcaggtgtcatccttagtaattgtgaagtttcatttaaggtggaatcttgt aggccatccctagatctttgtttgtccagaaaggagagaggagcaaatgttgataccttg aatgctgtacacaagctattcattcattattgcacacaatataatctgccaaaccttctg gatctgtaccttgatcatcacgatttggtcctagataatgattcactcagttcattgcag gaagctgttggtgattctcactgggcaaaatggttgctgctcaccaggatcaagggccgg gagtatgatgcttcattttcaaatgcgcgctcaattatgtcacgtggtgcggcaccaaat ggtgaacttagtgttgcagagattgatgaaattgtgtgtactgttgatgacattgctgaa ggggcaggagaaatggcagctttggcaactatgatgtgtgctcctgtgccaattcaaaaa tccctgagcactggcagtgtgaacaggcacagtaactcttctgcgcagtgcacattggag aatttgagatcatttcttcagagattccctaccttatggagtaagcttgttactgcttgt attggagaagatatttctggcaaccttttgcggaccaaagctaagaatgtcttgtcagag tatctgaattggcgtgacagtgtattcttctcagctgcacgtgatacctcactcctgcag atgttgccttgctggtttcctaaggcggttcgtagattagttcagctttatatccaggga cctcttggatggctgtctttctcaggatatcctacaggagaatatctactgcacagaggt gttgagttctttataaatgtggacgatccgactgagattagtgccatatcttgggaagca atcatacagaagcacatcgaagaggaacttcataacacaaaaactgagggagccgaactt ggacttgagcactttctgcatcgtggacggccacttgcagcttttaatgctttcctggaa catagagttgaaaagctgaaactggaagatcagtctggctcttcgacacatagacaaaga aatatgcagtcagatgttccgatgctacttgcacctctgacgcagactgatgagtcactt ctttcatctgccataccacttgctatcacacactttaaggattctgtgttagtggcttca tgtgccttcctgcttgaactttgtggtttatctgccagcatgcttcggatagacgtggca tcattgagaaggatatcatccttttacgaatcaaatgataatgcggatatggcacaacaa aaactgctcaagggttctctgtttcatgcggtatctagtgaaggtgatctaatggggtca ctagctagggccctagctaatgaatatgcttatcctgatatttcaagtgtctctaagcaa aaacatactccaaacagtaattctggtgctcaaccctgtcttccgctaatgcttgttctt catcatctggaacaagctagtcttccagatattggagtagatagaaaaacaagtggatac tggctgttaacaggtgatggtgatgggtctgaactgcggtctcagcagacatctgctagc ttgcattggagtttagtgactcttttctgtcagatgcataagattcccctaagcaccaaa tacctggccatgctagcaagagacaatgattgggttggattcttatctgaagcgcagctt ggaggatacccatttgatacggtgctcaatgtggcatcaaaggattttggtgaccaacgt ttaaaagctcacatactgactgttttgagatatgccaactctaaaaaaaaagctaccata tcgtactcagatgacacaagcggaggttttacatgttccttctcagaggatggatcttat gtctctgctgaactctttcgcgttttggcttactccgagaagctaaagaatcctggaggc taccttttatcgaaagctaaggagttatcgtggtctattttggctctcatagcatcatgc tttcaagatgttgctcctatatcatgcctaacgatatggttggaaattaccgctgccagg gaaacatcatctattaaggtgaatgatataaccactaagatagccgaaaatatagcagca gccgtcgtatctacaaattccttgccaacggatgctaggggtgtccaatttcattacaat aggaggaatcctaaacggagacgacttattgcacatacatctgaggattcattggcttca gctaatactttaaacacctcggctggtagttttttttcctcccacagaacagaagctgca gaagatgaaaaagctgaagataccggtgttactaatgactcgtctgatgagcatgcatct ctatcaaaaatggtcgcagtgctgtgtgaacaacacttgtttcttcctctgctaaaagct tttgaattgttcctcccgtcctgctcgctactgccatttttccgtgctcttcaggcattt tctcaaatgcgcctgtctgaagcttcagcacatctgggttctttttgggctagagttaaa gacgaatcaatgccttttcagtctaatacggccaaagaagtcaattttggggcatcttgg atcagtaaaacagctgttaaagctgctgatgctattttgtcaacctgcccgtctccatat gaaaaaagatgcttactgcaacttcttgctgcaattgattttggtgatgggggatccgcg gcaacatattatcggcgtctttattggaaagttaatttggctgagccatcactccggacg gagaatgatcttggcttaggaagtggggctcttgatgatggctctcttctggcagctcta gaaaagaacaggcagtgggagcaagcacgaaactgggccaagcaacttgaaaccattggt gccccttggacatcctctgttcatcatgttactgaaacgcaggccgaatccatggttgca gaatggaaagaattcctttgggatgttccagaagagagaatcgcattatggggtcactgc caaactctgttcatcagatactcgttccctgctttacaggcaggtttatttttccttagg catgcagaagcggtggagaaagatctgcctgcaagagaaatctatgagctgttactgcta tcccttcagtggttgagtgggctaacaaccctgtcgcacccggtttatcctttgcatctt ctgcgagaaatcgagactagagtgtggctattggctgtagaagcagaagcacatgtgaaa aatttaggagcatttagtccgagtagtaacggaaaagacatggcgagtgggaatagttca aatcttatagaccgaactgcaagtattataacaaaaatggacaaccatatttcttcagca acaaaaagtaaaactggagagaagcatgactccagggcccctggccaagtacatcaaaga aaccaagacacgagcacttcaacatttggtgccagcacaaagcccaaaaggagagcaaaa ggaaatgtcccacaaagaagacattttgtggattcttcagatcggaatactgattttgaa gattcatctctgctaaacattaaaagcgagtcccagcttcaagaggaaagcacgggtttg gagatatccttatcaaagtgggaagaaagtatagaacctgcggagctggaaagagctgtt ctctctttactggagtttgggcaagtaacagctgcaaagcagctccaacttaagcttgct ccaggaaacctaccttctgagctgataattctggatgctgttatgaagctagcaatgctt tctacgcctcgcagtcaagtaccactgtcaatgttggaggatgaagttcgttctgtcatt caatcacacagtctaaaaatggaccaacatatgattgaaccgctgcaggttttggagagt ctatcaaacattttaattgaaggcagtgggcgtgggctggcaagaaaaatcattgcagtt ataaaagctgctaacatactgggccttacattcaccgaggcatacctaaagcagcccata gagttgttacggttactttctcttaaagcacaagattcctttgaagaagcatgtctcctt gtccaaacacattccatgcccgctgctagtatcgctcagattcttgcagaatccttttta aagggtttgctggcagctcatcgtggaggatatatagattctcaaaaggaggaagggcct gctccacttttgtggagattttcggactttttgaagtgggcggagctttgcccatctgaa caagaaattggtcattcattaatgcgtcttgtgattaccgggcaggaaatacctcacgcg tgtgaggttgagctgcttattttatcacatcacttctacaagtcatccacgtgccttgat ggagttgatgttcttgtggcacttgctgccactagggttgaggcttatgttgctgagggc gatttctcatgcctgggtcgtctaataactggagtcggaaactttcatgctcttaatttc attctcaatattctaatcgaaaacgggcagctcgatctcttactacaaaaattttctgct gctgctgatgcaaacactggcactgcccaggctgtcagaagtttccggatggctgttctg acttcgttgaatctctttaacccagatgaccatgatgcattcgcaatggtatataaacac tttgacatgaagcatgaaacggctgctttgctagaggcacgcgcagatcaggctgcacag caatggtttctccgttatgacaaggatcaaaatgaagatctccttgattcgatgcgctat tacattgaagctgctgaagttcacacttcaattgatgctggaaacaaagcacggaaggcg tgtggtcaggcttcccttgtctcccttcaaataaggatgccagattccaagtggctctgt ctatcggaaacaaacgccaggagagcacttgttgatcaatcccgtttccaggaagccctg attgtagcagaagcttatggtcttaatcagccaagcgaatgggcgcttgtgctttggaat ctgatgctcaaacccgaactagcggaagaatttgtggctgaatttgtagcggtgcttccc ctacaggcttcaatgcttctggaactggctagattctaccgagcggaaatggcagctcga ggcgaccagtctcaattctcagtctggctcacaggaggagggttaccagctgagtgggcc aaatacatgtggagatcattcaggtgtttgttgaagagaacacgggatttgaggttacgg ttacagctagctacaacagcgacgggattccctgacatggtcgatgcgtgtatgaatgcg ttggataaggtcccagaaaatgctggaccacttgtaatgaagaaaggacatggaggagga tacttaccactcatgtga

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