Epilithonimonas zeae: KI430_11855
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Entry
KI430_11855 CDS
T08226
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
eze
Epilithonimonas zeae
Pathway
eze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KI430_11855 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eze03021
]
KI430_11855 (rho)
03019 Messenger RNA biogenesis [BR:
eze03019
]
KI430_11855 (rho)
Transcription machinery [BR:
eze03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KI430_11855 (rho)
Messenger RNA biogenesis [BR:
eze03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KI430_11855 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
Rho_N
AAA_25
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
UQB67728
LinkDB
All DBs
Position
2634164..2635942
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AA seq
592 aa
AA seq
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MFNIETLRSKSDEELAQLSKDLGVKLAKKSSPEDTVFAILDYQASNPKIIKDYLNATQEN
MTKKTEENSTENAAPAKKRGRKPAEKPKEENSVPAETPVIAVTEEAPAAVVKEEAKAPNP
PKKKTPRARITPAQTEEQVSTTPVSTDETTPKTDEKPEQEERKPQQKQQPKQQNNPQHQQ
KTNNNRGQQKTQNPNSQQHNNHKEQSEAQQHEAPAPKKEFNFDGIVTIEGVLEILPDNYG
FLRSSDFSYISSPDDVYVSTNQIRNYGLKTGDTVKGIVRLPKEGEKYFSLQKPTEVNGRD
LAFIKDRVAFEYLTPLFPQEKFNLAGKNSTLSTRIVDLFAPIGKGQRAMIVAQPKTGKTI
LLKDIANAISANHPEAYMMVLLIDERPEEVTDMQRSVNAEVIASTFDEAADKHVKVANLV
LSKAQRMVECGHDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKRFFGAARK
IENGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKIANKRIYPAVDLVASSTR
RDDLLMDEATQQRMWIMRKYLADMNPLEAMEFVQKQIKGTRNNEEFLMSMNR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatattgaaacgctacggtcaaaatccgatgaggaattggctcaactttctaaa
gatttaggcgttaaattggcaaagaaaagctctccggaagacactgttttcgcaattctg
gactatcaggcttctaatccaaaaatcattaaagattatcttaacgctactcaagagaat
atgacgaaaaaaacagaagagaattctacggaaaacgcagctcctgcaaagaaaagaggc
aggaagcccgcagagaaaccgaaagaagaaaactcagttccagcagaaactcctgttatt
gctgtcacagaggaagctcctgcggcggttgtgaaggaagaagcgaaagctcccaatcct
ccaaagaaaaagacacctagagcgagaatcactccagcgcagacagaagaacaagtttct
acaactccagtttcgactgacgaaacaaccccaaagactgatgaaaagcctgagcaagag
gaaagaaagcctcaacaaaagcaacagcctaagcagcaaaacaatccgcagcatcagcaa
aagaccaataataacagaggtcagcaaaaaacacaaaatcccaattcccaacaacacaac
aatcataaagaacaatctgaggcacaacagcacgaagctccagctccaaagaaggaattt
aactttgatggaattgtaacgatagaaggtgttttggaaattcttccggataactacgga
ttccttcgttcttcagatttcagttatatctcttctccagacgacgtttacgtttctacc
aatcaaatcagaaattatggtttgaagaccggagacaccgtaaaaggaatcgtgagactg
ccaaaagaaggcgaaaaatatttctcgcttcagaaacctacagaagttaacggaagagat
ttagctttcatcaaagacagagttgcctttgaatatctgacaccgcttttccctcaggaa
aaattcaatctggcgggtaaaaactctacactttctacaagaattgtagacttgtttgcg
ccaatcggaaaaggacaaagagcaatgattgttgcacaaccaaaaaccggtaaaacaatt
ttactaaaagatatcgccaacgccatttctgccaatcatccagaagcttatatgatggtt
cttctaatcgatgaaagaccggaggaagttacggatatgcagagaagcgtaaatgcggag
gttattgcttcgacttttgatgaagcggctgataagcacgtaaaagttgctaatttggtt
ttatcaaaagcgcaaagaatggtagaatgtggtcacgatgttgtcattcttttggactct
atcacacgtttggcaagagcttataatacggtaacgccggcttctggaaaaatcctttcc
ggaggtgtggatgcaaacgcccttcatagaccaaaacgtttcttcggagcggctagaaaa
atcgaaaatggaggttctttaacaattatcgcaactgctttgattgatacaggttccaaa
atggacgaagtaatcttcgaagagttcaaaggaaccggaaatatggaattgcaattggat
agaaagattgctaataaacgtatttatccggctgtagatttagtggcttccagtactaga
agagatgatcttttgatggacgaagcgacacagcaacgtatgtggattatgagaaaatat
ctggctgatatgaatcctttggaagctatggaatttgttcaaaaacaaatcaaaggcact
agaaataatgaggaattcctgatgtctatgaacagataa
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