Ficedula albicollis (collared flycatcher): 101805719
Help
Entry
101805719 CDS
T02815
Symbol
THOC1
Name
(RefSeq) THO complex 1
KO
K12878
THO complex subunit 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03013
Nucleocytoplasmic transport
fab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101805719 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
101805719 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101805719 (THOC1)
03041 Spliceosome [BR:
fab03041
]
101805719 (THOC1)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101805719 (THOC1)
Spliceosome [BR:
fab03041
]
Complex C
Other components
EJC/TREX
101805719 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101805719 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
101805719
NCBI-ProteinID:
XP_016151584
LinkDB
All DBs
Position
2:107702704..107722973
Genome browser
AA seq
667 aa
AA seq
DB search
MMRFWGLSMQDQVLNSMILTSTREALINKSIKPLLTAFNQVPGSENEKKCTLDQAFRVVV
EEEIINKAPCENLLAIISLAINGVTEGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKN
VATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQS
QFNLENVTVFNTNEHESTLGQKHTEEREEGMDVEEGEMGDDEAPTNCSIPIDYNLYRKFW
SLQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFA
KFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKA
VYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERSHPEFQLGPPDAKPMR
PVRKRPAPEDFLGKGSSKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAI
EQADPENMVENKYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAK
ELPPPSEEIKTGEDEDEEDNDALLKENNESPEVQRDKAMTGEQIESFANRLGEQWKALAP
YLEMKESDIRQIELDSEDVKMRAKQLLVAWQDQEGAHATPENLITALSKAGLGDLAESFT
NDTEGSS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgattctgggggctgtccatgcaggaccaggtgttgaactcgatgatccttaca
tccaccagagaggctctgataaacaaaagcatcaagccattgttgactgcatttaaccag
gttcctggaagtgaaaatgaaaagaagtgtaccttggatcaagcttttagagttgttgta
gaagaagaaataataaacaaagctccatgtgagaatctcctggcaattatctctcttgct
attaatggagtcacagaaggtatctgcactgcatcaactccttttgtgcttttgggggat
gttctggattgcctccctttggatcagtgtgacaaaattttcacttttgtggagaaaaat
gttgctacgtggaaatcgaacacattttactctgcagggaaaaattacttgctacgcatg
tgcaatgacctcctaagaagattatctaagtcacaaaacacagttttttgtggaagaatt
cagctgttcttggctaggttatttccactttcagaaaagtcagggcttaacctacagagt
cagtttaacttggaaaatgtcactgttttcaataccaatgaacatgagagcactctggga
cagaagcacactgaggagagggaagaaggtatggatgtggaagaaggtgaaatgggagat
gatgaagcaccgacaaactgttccattccaatagattataacctgtatagaaaattctgg
tcacttcaagattattttagaaatcctgtgcagtgctatgagaaggtgtcatggaaaacc
tttcttaagtactcagaagaagttttggctgttttcaaaagttacaaattggatgacact
caggcttcccgaaaaaagttggaagaactaaaaacaggaggagaacatgtatattttgca
aagttcctaactagtgaaaagctgatggatttacaactgagtgacagtaatttccgccgt
cacatcttgttgcagtacctaatactatttcagtatctaaagggacaagtcaaatttaaa
agttcaaactacgttctaacagatgaacagtctctttggattgaagatactacaaaagca
gtttaccagcttctttcagaaaatcctccagatggagaaagattctctaaaatggtagag
catatattaaatactgaagaaaactggaactcatggaaaaatgagggctgcccaagcttt
gtgaaagaaagatctcatccagagtttcagcttggacctcctgatgcaaagccaatgaga
cctgtgagaaagaggccagctccagaggacttcttaggaaaaggatcaagcaaaaaaatc
cttatggggaatgaggaactgacccgcctttggaatttgtgtcctgataatatggaagcc
tgtaaatctgagagtagggaatatatgccaacactggaggaattttttgaggaagctatt
gaacaagcagaccctgaaaacatggttgaaaataagtataaggctgtgaacaattctaac
tatggctggagagcactgagacttctggcacgcagaagtccccacttcttccagccaaca
aaccaacagttcaagagtttacctgaatatctagaaaacatggtaatcaaattagccaag
gagctgcctcctccttctgaagaaataaaaacaggtgaagatgaagatgaggaagataat
gatgctttattaaaggaaaacaatgaaagtccggaggtgcagcgggacaaagccatgacg
ggcgagcagatcgagtcctttgccaacaggctgggggagcagtggaaggccttggccccc
tacttggagatgaaggagtctgacatccggcagatcgagctggacagcgaggacgtgaag
atgagagccaagcagctgctggtggcctggcaggatcaggagggcgcccacgccaccccc
gagaacctgatcacggcgctgagcaaagccggcctcggggacctggccgagagcttcacc
aacgacaccgaaggcagcagctaa
DBGET
integrated database retrieval system
