Ficedula albicollis (collared flycatcher): 101806571
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Entry
101806571 CDS
T02815
Symbol
RC3H2
Name
(RefSeq) ring finger and CCCH-type domains 2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101806571 (RC3H2)
04121 Ubiquitin system [BR:
fab04121
]
101806571 (RC3H2)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
101806571 (RC3H2)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101806571 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_2
zf-RING_UBOX
Prok-RING_4
zf-CCCH_4
zf-C3HC4_3
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
101806571
NCBI-ProteinID:
XP_005055764
UniProt:
U3JH35
LinkDB
All DBs
Position
17:complement(10585005..10598977)
Genome browser
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISSTVRTFPLLNKVGVNSSVSTTTGNVISVI
GSPEATGKMVPSTNGIANLETGVPQLIPRCADTSLRALENTKKGGKTGANGQNASGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPAPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKIGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSA
SSARYAERDRFIVTDLSAHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGEADYPEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQEDQLLNGTTVENGHLLKQHQKESLEQKRQSLGEDRVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaatgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacaccgtgtgcaagacc
tgcctgaacaagctccatcgcaaggcatgtccctttgaccagactgccatcaacacggac
atcgacgtgcttcctgtgaactttgcactcctccagctggttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtcccatgcagaggaaacttgtgacactggtgaattgt
cagctggtggaggaggagggtcgggtcagagccatgagggcagctcggtcgctgggagag
agaactgtcacagaactcatcctgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgagggtgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctggaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagttccggagttacgaggctttgcggagagagcac
gatgcccagattgttcacattgccatggaagcaggacttagaatatcaccagagcagtgg
tcttcccttctttatggagacctggcacataaatcacacatgcaatccattattgacaag
cttcaatctccagaatcttttgctaagagtgtacaagaattgacaattgtcttgcagcgc
acgggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcgatggtcgct
gtaaagactgtggtgcatgggctggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaaggggggtgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaatatcgcttgaggaacaaaaaaatcagctcaacagtgagaacattcccccttcta
aataaagttggcgtgaacagctccgtctctaccacaacgggaaacgtgatctctgtcata
ggaagccctgaggcaacgggcaagatggtgccaagtactaatggaatagctaatctagaa
actggggtccctcagctgatcccccgctgtgcagacacctccctgagagctctggagaac
accaagaagggagggaagactggagccaatggccagaatgcttctgggtcccctacagaa
tcacttcctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctcccaaatccagc
ccgtttgttcccagagtacctgtctaccctccacattctgataatgttcaatatttccaa
gaccccaggactcagctgtcatatgaagttccacagtacccacagacaggctattatcca
gcacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagcacg
tttccccctcgggatcgactgagctctccctaccagcctcctcccccgcagccctacggg
cccgtccctcccgtcccctctggaatgtacgctccggtttatgacagcaggcgcatctgg
cgcccgcagatgtacccacgagatgatatcatcaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcgttacgggagaggtacaactcactggatggg
tattactctgtggcttgtcaacctcccaacgagcagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagattggttatgatgagcagctgagacggaagccagagcaatgg
gcacagtaccacacacagaaaactcctctggtatcgtcaacccttcctatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattccaatgccgtgttaatggatttggacagtggggatgttaaaaggagagtgcat
ttatttgaaacgcagagaagggcaaaggaggaagatcctataatcccgttcagcgatgga
cccatcatctccaagtggggtgcaatctccaggtcatcccgcacaggttatcacacaaca
gatccaatccaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagat
tatgtcccttatgtcaatgctgtagactcaagatggagtgcctatggctcagattctgcc
tcctcagcacgttatgcagaacgggacagattcatagttacagatttgtctgctcacaga
aagcattccagcactggagatcttctgagtattgaattacagcaggctaaaagcaactcc
ttactccttcagagagaggcaaatgcacttgccatgcagcagaagtggaattctctagat
gaaggcagtcgtcttaccttaaaccttttaagcaaggaaattgatttgaggaatggtgag
gctgattatcctgaagactgtgcagacacgaagccagaccgagacattgaattggagctg
tcagccctcgacacagatgaacctgatggacaaggtgaacagatagaagagattctggac
atacagctagggattagctcccaagaggatcaactgctcaatggaacaactgtagagaat
gggcatctgctaaagcagcaccagaaggaatctctggaacagaagagacaaagtttaggt
gaagatcgtgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
