Ficedula albicollis (collared flycatcher): 101810697
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Entry
101810697 CDS
T02815
Symbol
KDM1A
Name
(RefSeq) lysine demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101810697 (KDM1A)
Enzymes [BR:
fab01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
101810697 (KDM1A)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
101810697 (KDM1A)
REST complex
101810697 (KDM1A)
Histone demethylases
101810697 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
HI0933_like
FAD_oxidored
FAD_binding_3
Thi4
Pyr_redox_3
2-Hacid_dh_C
Sec10_N
DUF6827
GIDA
MurD-like_N
Lycopene_cycl
IlvN
DUF1180
CdiI_2
Motif
Other DBs
NCBI-GeneID:
101810697
NCBI-ProteinID:
XP_016159141
LinkDB
All DBs
Position
23:complement(3055686..3079640)
Genome browser
AA seq
737 aa
AA seq
DB search
MDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPAPAEEENESEPEEPSGQAGGLQDDS
SGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWL
DNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVI
IIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPM
AVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLN
NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQY
KEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLS
SRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGL
DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPP
LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPI
LLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYS
YVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREA
GRIADQFLGAMYTLPRR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagtcttgcaaacctatcagaagatgagtattattctgaagaagagagaaat
gctaaagctgagaaagagaaaaagctacccccaccacctccaccagctcctgcagaagaa
gagaatgaaagtgagccagaggagccgtctgggcaagcaggaggacttcaagacgacagt
tctggagggtatggagacggccaagcatcaggtgtggagggtgcagctttccagagcaga
cttccacatgaccgtatgacatcccaagaagctgcctgcttccctgatataatcagtggg
ccccagcagactcagaaggtgtttctgtacatcaggaaccgcaccctgcagctctggttg
gataacccaaagattcagctgacatttgaagcaactatccaacaattagaagcaccttat
aatagtgacacagtgctcgttcacagggttcacagctacctggagcgtcatgggctgatc
aactttggcatctacaaaagagtgaagcccctcccaaccaagaagacaggaaaggtgatc
attattggttctggagtctctgggttggcagcagctcgccagttgcagagttttggaatg
gatgtcacagttctggaagccagagaccgagtaggaggaagagttgccacctttcgcaaa
gggaattacgttgctgatctgggagcaatggtggtaacaggacttggaggaaatcccatg
gctgtggttagcaaacaagtaaatatggaattggcaaagatcaaacaaaaatgtccactt
tatgaagccaatggacaagctgttcccaaagagaaagatgaaatggtggagcaagaattt
aatcgtctgctggaagccacatcctatcttagtcatcagctggattttaatgttctcaat
aataagcctgtctccctaggtcaggctctggaggttgtcatacaattgcaggagaaacat
gtgaaggatgagcagattgagcactggaaaaaaattgtgaaaacacaggaggaattgaaa
gatcttcttaacaagatggtgaatttaaaggagaagattaaagaacttcatcagcaatat
aaggaagcatcagaagtgaagccacctcgagatattacagcagagttccttgtgaaaagc
aagcacagagatctgactgctctttgcaaggaatatgatgaattggcagaaacacaagga
aaactggaagagaaattacaagaacttgaagccaacccaccaagtgatgtttatttgtca
tcaagagacaggcaaatacttgactggcattttgcaaacctagaatttgctaatgctaca
cccctttccacactttcactgaagcactgggaccaggatgatgactttgaattcacaggc
agtcacttgactgtgaggaatggatattcctgtgtgcctgtagccttagcagaagggttg
gacatcaaattaaacacggccgtgcgacaggttcgctacacagcctcaggctgtgaagtg
atagctgtaaatacccgatctactagccagaccttcatttataagtgtgatgctgtgctg
tgcactctgcccctgggagtgctgaagcagcagcctccagcagttcagtttgtgccacct
cttcctgagtggaaaacctctgcagtgcagcggatgggatttggcaacctgaacaaggtt
gtgttgtgttttgatcgtgtcttctgggatccaagtgtcaatctgtttggccatgttggg
agcactactgcaagcagaggagaacttttcctcttttggaacctgtacaaagcaccgatt
ttgttggccttggtagcaggagaagcagcagggatcatggagaacatcagtgatgatgtc
attgttggtcggtgccttgccattctcaaaggcatctttggcagcagtgctgtgccccag
cctaaggagaccgtggtgtcccgctggcgcgctgacccgtgggccagggggtcctactcc
tacgtggctgctggatcctctggaaatgactatgatctgatggctcagccaattactcca
gggccagccattccaggtgctccacagcccatcccccggctgttcttcgcgggcgagcac
accatccgcaactacccggccacggtgcacggggcgctgctgagcgggctgcgcgaggcc
ggccgcatcgccgaccagttcctgggcgccatgtacaccctgccgcggcgg
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