Ficedula albicollis (collared flycatcher): 101818813
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Entry
101818813 CDS
T02815
Symbol
DHX58
Name
(RefSeq) DExH-box helicase 58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101818813 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
fab04054
]
101818813 (DHX58)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101818813 (DHX58)
Pattern recognition receptors [BR:
fab04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
101818813 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
Helicase_C
ResIII
DEAD
AlaDh_PNT_C
TTRAP
AAA_11
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
101818813
NCBI-ProteinID:
XP_005059759
LinkDB
All DBs
Position
27:3139829..3145320
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AA seq
637 aa
AA seq
DB search
GGRHLESRRGRKVAVLVNKVHLVDQHTEKEFHQLRDAFKVTSISGDTSHKTFFADLVKKN
DVVICTAQILQNALVSTEEDMHVELADFSLLVIDECHHTLKDAVYNKIMLRYLQHKLSGE
QNLPQILGLTASPGTGRATSFEGAVDHILQICANLDTEKITSMQDEVQHLQSCVPQPKKQ
YDLCQERAQDPFGEQLKKVMVQIQQFMGEPDLLQDFGTQIYEQRIVELEKRATEMFRRKM
RVCALHLRKYNDALLINDTVRMVDAFQCLQQFYSTERDKKDPTEQFLAATFEKNRMSLQA
LAGDHRYENPRLGKLEGILREHFQPLGTSRGIVFTKTRQSAHSLFSWLQTSSTLCGQHIR
AAVLTGAGYSNQTRHMTQNEQQNVIKQFREGALNLLFSTSVAEEGLDIPECNIVVRYGLM
TNEISMMQARGRARAENSVYSVLAKANSREVTRELLNEDLVDLMKRAIQAVQAMPEQEYC
QKIRELQQVAVASWLMKESRISERRRLHDPAAVRLYCANCGTAVCRGSDIRTVEGMHHVN
IDPQFRSFYRVSSGKMQFQRTFRDWEPGCRISCKACSQDWGMEMLYQQVKLPILCIKNFV
VETPAEKRRYKKWGSVTFPIKAFDYVEYCSDTYGLCL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gggggccggcacctggagagccggcggggccgcaaggtggccgtgctggtcaacaaggtg
cacctggtggaccagcacaccgagaaggagttccaccagctgcgggacgctttcaaggtg
acgtccatcagtggagacaccagccacaaaactttcttcgccgacctggtgaagaagaac
gatgttgtcatctgcacagcccagattctgcagaatgccctggtcagcacggaggaggac
atgcacgtggagctggcagatttctcactgctggtgatagacgagtgccaccacacgctc
aaggacgctgtctacaacaagatcatgctgagataccttcagcacaagctcagtggggag
cagaacctgccacagatcctggggctaacggcatcccctggcactgggagggcaacatcg
tttgagggggctgtagaccacatcctgcagatctgtgccaacctggacactgagaagatc
acatcgatgcaggatgaggtgcagcacctgcagagctgtgtcccccaacccaagaagcag
tatgatctgtgccaggagagagcgcaggacccctttggtgagcagctgaagaaggtgatg
gtgcagatccagcagttcatgggggagccagatctcctgcaggacttcggcacacagatt
tacgagcagcgcattgtggagctggagaagagagccacagagatgttccgtcgcaagatg
cgggtgtgcgccctgcacctgcgcaagtacaatgacgctttgctgatcaacgacaccgtg
cggatggtggacgccttccagtgcctccagcagttctacagcactgagagggataagaag
gaccccaccgaacagttcctggctgccacgtttgagaagaacaggatgagcctgcaggca
ctcgctggggaccatcgctatgagaaccccaggctgggcaagctggaggggatcctgcgt
gagcactttcagcccctgggcacttctcgtggcattgtcttcaccaagaccaggcagagt
gcccacagcctgttcagctggctgcagaccagctccacactctgtgggcagcacatcagg
gctgctgttctcaccggtgctggctacagcaaccagaccaggcacatgacacagaacgag
cagcagaatgtgatcaagcagttccgtgagggagccctcaaccttctcttctctaccagt
gtggccgaggagggcctggacatccccgagtgcaacattgtggtccgctatgggctgatg
accaatgagatctccatgatgcaggcccggggccgtgcccgtgctgagaacagtgtctac
tctgtccttgccaaagccaacagcagagaggtgacccgagagctgctcaatgaggacctg
gtagacctcatgaagagggcgattcaggcagtgcaagccatgcctgagcaggagtactgc
caaaagatccgggagctgcagcaggtggccgtagccagctggctgatgaaggagtccagg
atcagcgagcggcggcggctgcacgacccggcggccgttcgcctgtactgtgccaactgc
ggcacggccgtgtgccgtggcagcgacatccgcaccgtggagggcatgcaccacgtcaac
atcgacccccagttcaggtcattttacagagtttcttcagggaaaatgcagttccagcgg
actttcagggactgggagcctggctgccgtatctcctgcaaagcctgcagccaggactgg
ggcatggagatgctgtaccagcaggtgaagctgcctatcctctgcatcaaaaacttcgtg
gtggagacaccagcagagaagaggaggtacaagaagtgggggtctgtgacattccccatc
aaggcgtttgactatgtggagtactgctctgacacctacggcctgtgcctctaa
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