Ficedula albicollis (collared flycatcher): 101819971
Help
Entry
101819971 CDS
T02815
Symbol
POM121, POM121C
Name
(RefSeq) POM121 transmembrane nucleoporin
KO
K14316
nuclear pore complex protein Nup121
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101819971 (POM121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101819971 (POM121)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101819971 (POM121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
101819971
NCBI-ProteinID:
XP_016158359
LinkDB
All DBs
Position
19:complement(199754..212999)
Genome browser
AA seq
1107 aa
AA seq
DB search
MTRREEGGVVRGHGGGMGTQCRGRAPQRVRREPAETAGPCSRGRPPDNALEALLTPEAPP
RAATPPGPRRRYPLPDARPAVPLCLPAARWEGGSPRSAPWARRAGPLRSPVTVRIAPPAV
GIARSPALEQLVSPLAFPATSSPDPCAKETVLNAIRESRKRAVEEDEEEDQTSGNDQESK
RRRHDSSGSGQSAFEPLVANGAPASLIPKPGSLKRGLVSQCPDDCSNKRSRTSSMSSLNN
TYTGGIPSSIRNAIASSYSSSRGLTQLWKRSGVNMSPLSSPASSRPQTPEWPLKKAREEE
SHCSSASTPVKSDKELLTEKVVESPVWKKQNSLSPPSASGSSGKRKRKIPLLSSLRGDQL
VLPPPPQLGYSITSEDLDAEKKAMMQWFNSVLEDKADAVPSTTAAMMPVSKPLVFAVTSP
GPMPASTAPAPASSSLLDSLKKMQSSQAVSTAPDSTGIAAASQPPPSAAQPPAPAVSLES
SSLPAISADIKPVPVLSTPGPSALPALAVQPPSSLAPPVFTELGQTPSKPPSFPKPSILF
GMPNTTPDSQPALTVATALPTVATAAPTASTAVPTTVTATPSTTPIFKPIFGAVPKSENA
AGCTAVTCTTATVEATASSGPASASPTSSIFKPIFGSVTAASSPAKVSPFAFKPAAQPAS
EPPTASTATLAGFTGLPSVIFTTAATTATTQSSSTDATIKPVFSFGLNPPASTGPAPSVT
VTAATSTSTTQPFLFGGLASSAPSTEASFATSGPVFQFGKPPPATVTATTSVPGGPAFGQ
VPTSSTAAATTVGFSIFGSTTLTSSAPATTAQAPLTFGSSVSAFGSFSATTKPPPPYPGT
GSQLTFSTGAADSQVPASKPPGPISFTPQFSFGAPPAQSVAQPAFGSGAQPAFGTTSAQG
SFGTSSTQAAFGTTTSVFSFGTATSTTSSFGATTQTTSSSTGAAVFGTTPSPFTFGATTQ
SGPSTSAFGMGTPGLSSGSPAVAFSFGAGQSGAAPAATPFGSSLPQSALGAQGQSTPFAF
TMTSTPNSKPAFGGPPVPTFGQGTPVPGAVGSGSSTLSFRTPSNPASSFGGVGTSFGSST
PIFSIGSGSKMGTRQRLQARRQHTRKK
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgacgagacgggaggaagggggtgtcgtgaggggtcacgggggtgggatggggacgcag
tgccggggccgcgccccgcagagagtacgccgggagcccgcggagacggcggggccgtgc
tcccgaggccgcccacccgataacgcgctggaagcgctgctcaccccggaagccccgccc
cgcgcggccacacccccgggcccgcgccgccggtacccgctgcctgacgcccggccggcc
gtgccgctgtgcttgcccgccgcccgctgggagggcggctccccccgcagcgcgccttgg
gcccgccgtgccggcccgctccgcagccccgtcaccgtgagaatcgccccgccggccgtc
ggcatcgcccgctcaccggctctagagcagctggtctcgcctctggccttcccggccacc
agcagccctgacccatgcgcgaaggagactgtgctgaatgccatcagggagagcaggaaa
agggccgtggaggaagatgaggaagaggaccagacttctgggaatgatcaagagagcaaa
agaaggcgccacgacagcagtggaagtgggcagtcagcatttgagccactggtagccaat
ggtgcccctgcttctctcatacccaagccaggctctctgaagaggggcctcgtctcacaa
tgcccagatgactgctccaacaagagatctcgcacctcctccatgagctccctcaacaac
acctacactggtgggatccccagctccatccgcaacgccattgccagttcctacagctcc
agccggggcctcacacagctgtggaagagaagtggtgtgaacatgtcccctctgtccagc
ccagcgtcctcccgcccccagacaccagagtggcctctcaagaaagccagggaagaggag
tcacattgttccagtgcttccaccccagtgaaatcagacaaggagctgctgacagagaaa
gtggtggagtcaccggtgtggaagaagcagaattccttgagcccgccatccgcatcaggg
agcagtgggaagcgcaaacggaagatccccttgctgtcgtctctccgtggggaccagctg
gtgctgcccccgccacctcagctgggctactccatcacctcagaggacctggacgcagag
aagaaggcaatgatgcagtggttcaacagtgtcttggaggataaggctgatgcagtcccc
agcaccactgcagcgatgatgcctgtgtccaaaccactggtgtttgctgtgacctcccct
gggcctatgcctgcctccacagctcctgctccggccagctcctcactcctggacagcctg
aagaagatgcagagcagccaggctgtatccacagcaccagactccactggaattgcagca
gcatcccagccacctccctcagctgcacagccacctgctcctgctgtgtcattggagtcg
agctctctgcctgccatctctgctgacatcaagcctgtgcctgtattgagcacacccggc
cccagtgctctccctgccctggcagtgcaaccccccagcagcctggcacctcctgtgttc
actgagctgggccagacccccagcaagcctccctccttcccaaagccaagcatcctgttt
gggatgccgaacaccactccagacagccagccagcgctgactgtggccactgccctgccc
accgtggccactgctgcgcccactgcatccactgctgtgcccaccacagtcactgccacg
ccctccacgactcccatcttcaaacccatctttggtgctgtgccgaagagtgagaatgca
gcaggctgcacggctgtcacttgcaccacagccaccgtggaagccacagcaagctcgggc
cctgcctcagcgtctcccacatcctccatattcaagcccatctttggcagcgtcaccgca
gcttcatctccagcgaaagtctctcctttcgccttcaaacctgctgcacagccagcctca
gagccaccaactgcctccacagctactctggcaggattcacgggtcttcccagcgtcatc
ttcaccactgcagcgacaactgccactacccagagttcctccacagatgccaccattaaa
cctgtcttcagctttggactgaacccgcctgcttccactggccctgcccccagcgtgact
gtcaccgctgccacctccaccagcacaacacagccctttctgttcgggggcctcgccagc
tctgctcccagcacagaagccagctttgccacctcagggcctgtgttccagtttgggaag
ccacctccagctacagtcactgccaccaccagtgtcccaggaggccctgcctttggccag
gtacctacaagctcaacagctgctgccaccactgtgggctttagcatatttgggagcact
acactgacctcctctgccccagccaccacagctcaagcgccgctgacattcggctcctct
gtttcagcttttggcagcttttcagccaccacaaagccaccaccaccatacccgggcact
gggagccagctcaccttcagcactggggctgctgacagccaggtgcctgccagcaaacct
cctgggcccatcagcttcaccccccaattcagttttggagcccccccagcacagtcagtg
gctcagccggcatttggtagtggtgcccagccagccttcggcacaaccagtgcccagggc
tcctttggcaccagcagcacccaggcagcgtttgggaccaccacctcggtgttctctttt
ggaacagccacctccaccacatctagctttggtgccaccacccagactacaagcagcagc
accggtgccgctgtctttggcaccaccccatctccattcaccttcggggccaccacccag
tcgggcccctccaccagcgcctttgggatgggtacaccaggcctcagcagtggatctcca
gctgtggccttcagctttggggctgggcagagcggggcagccccagcagcaactcccttt
ggctcatctctgccacagagtgccctgggagcacagggccagagcacgcccttcgccttc
accatgaccagcactcccaacagcaagcctgcatttggaggacctccggtgcccacgttt
gggcagggcacacctgtccctggagctgtgggcagtggaagcagtaccctttcgttcagg
acacccagcaatcctgcctcgagctttggaggggtcggcacttcctttggttcatccact
cccatcttctccatcgggtcaggatccaagatgggcactcgacaacggctgcaggcgcgg
aggcagcacacccgcaaaaagtaa
DBGET
integrated database retrieval system
