KEGG   Flavobacterium agricola: K5I29_01105
Entry
K5I29_01105       CDS       T09474                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
fag  Flavobacterium agricola
Pathway
fag03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fag00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K5I29_01105 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fag03019]
    K5I29_01105 (rny)
Messenger RNA biogenesis [BR:fag03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     K5I29_01105 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH DUF99 KH_2
Other DBs
NCBI-ProteinID: UYW01557
LinkDB
Position
complement(217921..219486)
AA seq 521 aa
MSTTLIIIFCSVICLLIGFGFAKFLEKNTATSLLKNANSEANSILKDAKAEAESIRKEKL
FQAKEKFLELKSEHEKEILAKDKKMAEAEKRTRDKEAQVSNELAKSKKLNDELSKKMEDY
ENRLEHIDKKEKEIEKLHKHQVEQLEAISGLSQDEAKEQLIENLKADAKLSAMSYIQDTI
EEAKLTAQQEAKKVVINTIQRVGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRALEAA
TGVEIIVDDTPEAIILSCFDPVRREIARLALHKLVTDGRIHPARIEEVVSKTTKQIEEEI
VEVGKRTVIELGIHGLHPELIKTVGRMKYRSSYGQNLLQHSREVAKLCGIMAAELGLNVK
MAKRAGLLHDIGKVPETESDLPHAILGMQWAEKYGEKAEVCNAIGAHHDEIEMTSLISPI
IQVCDAISGARPGARRQVLDSYIQRLNDLENIAYGFNGVKNAYAIQAGRELRVIVESEKV
SDEMVATLSFDISQKIQTEMTYPGQVKITVIRETRAVNIAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgagtacaactttaatcataattttctgttccgtaatctgcttactaattggcttcgga
tttgcaaagtttttagaaaaaaataccgcaacttctttattgaaaaacgcaaattcagag
gcaaattcaattcttaaagatgcaaaagcagaagctgaatctattagaaaagaaaaattg
tttcaagcaaaagaaaaatttttagaactaaaatcagaacacgaaaaagagattttagca
aaagataaaaaaatggctgaagccgaaaaaagaactagagataaagaagctcaagtttct
aacgagttggctaagtcaaaaaaactaaacgatgaactttctaaaaaaatggaagattac
gaaaatcgtttagagcacattgacaaaaaagaaaaagaaatagaaaagttacacaaacac
caagtagaacaacttgaagctatttcgggcttatcacaagatgaagctaaagaacaatta
attgaaaacttaaaagctgacgctaaactttctgctatgtcgtacattcaagatacgatt
gaagaggcaaaattaacagcgcaacaagaagctaaaaaagttgttattaacaccattcag
cgagttggaacagaagaagcggtagaaaactgtgtttctgtttttaatatcgaatctgac
gatgttaaagggcgtattattggtcgtgaaggtcgtaacattcgtgctttagaagctgca
actggggttgaaattattgttgatgatacaccagaggcaattattctttcatgttttgat
ccggttcgtcgtgaaattgcgcgtttggctttacataaattagtaacagacggacgtatt
cacccagcaagaattgaagaagttgtttctaaaacaaccaaacaaattgaagaagaaatt
gttgaagttggtaagcgtactgttatagaattaggaattcatggtttacacccagaatta
attaaaacggtaggtagaatgaaataccgttcatcatacggccaaaacttattacaacac
tcgcgcgaagttgctaaattatgtggtattatggctgcagaacttggcttaaacgttaaa
atggcaaaacgtgcaggtttacttcacgatataggtaaagtaccagaaacagaatctgat
ttaccacacgctattttaggtatgcaatgggcagaaaaatatggtgaaaaagcagaagtt
tgtaatgcaattggagcgcaccacgacgaaattgaaatgacatctttaatttcaccaatt
attcaggtttgtgatgctatttcaggagcaagaccgggagcaagacgtcaggtactagat
tcgtacattcaacgtttaaatgacctagaaaacattgcttacggctttaatggtgttaaa
aatgcttacgcgattcaagcaggtagagaattacgcgtaattgttgaaagtgaaaaagtt
tctgacgaaatggtagcaactttatctttcgatatttcgcaaaaaattcaaaccgaaatg
acatacccaggtcaagtaaaaattacggttattagagaaacaagagctgttaacatagct
aaataa

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