Ferroplasma acidiphilum: FAD_1498 Help Entry FAD_1498          CDS       T04783                                  Symbol ligB Name (GenBank) ATP-dependent DNA ligase   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism fai  Ferroplasma acidiphilum Pathway fai03030   DNA replication fai03410   Base excision repair fai03420   Nucleotide excision repair fai03430   Mismatch repair Brite KEGG Orthology (KO) [BR:fai00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     FAD_1498 (ligB)    03410 Base excision repair     FAD_1498 (ligB)    03420 Nucleotide excision repair     FAD_1498 (ligB)    03430 Mismatch repair     FAD_1498 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:fai03032]     FAD_1498 (ligB)    03400 DNA repair and recombination proteins [BR:fai03400]     FAD_1498 (ligB) Enzymes [BR:fai01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      FAD_1498 (ligB)     6.5.1.6  DNA ligase (ATP or NAD+)      FAD_1498 (ligB)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      FAD_1498 (ligB) DNA replication proteins [BR:fai03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     FAD_1498 (ligB)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      FAD_1498 (ligB) DNA repair and recombination proteins [BR:fai03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      FAD_1498 (ligB)    NER (nucleotide excision repair)     Other NER factors      FAD_1498 (ligB)    MMR (mismatch excision repair)     Other MMR factors      FAD_1498 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  ARD85352 UniProt:  A0A1V0N5D9 LinkDB All DBs Position 1486522..1488270 Genome browser AA seq 582 aa AA seqDB search MLFSEASKKFMEMESTTKRLELTSILGSLLENAGDDLKELVYLIQGKLAPDYEGIEFGVS GKLIVKSLAAISGMDEEEVNKLFYKNGDLGITASEIREKMEQKPLFREDLTVHYVYTRLM ELAKSAGHGSVKGKTDIYADLMVNSYPEDIKYITRIIMGKLRLGVADSTILDSLVHAFFS KDNADMVETAYNFHPDIGLIATLLQKGDIKAISNIGPEPLIPFKVMLAERLRSIDDIREK MNHHVSFEYKYDGLRTELHKKGDKIKIFSRGLEETTENFPDIIENFKKSYSFESIIIDGE SVPFNPDTGELFPFQMVSKRRGRKYQITEKSTEIPLVMFIFDILELNGRILVNLPYEERR KILEENFVDNEHFRLATRLSSDDSEEINKFFEQSIEDGCEGIVAKDTSDESVYRAGARGW LWIKFKRDYQKELADSMDLVIIGAFNGRGRRAGAYGALLMASYNEETHAFESVTKLGTGF SDEVLFSLPKMLSDLVRDHKPAMVESKMVPDIWIYPQIVMEIQGAEITVSPIHTCAFGKI EKDSGLALRFPRLIKIRDDKNAEDATTTNEIIELYKMQKKTK NT seq 1749 nt NT seq  +upstreamnt  +downstreamnt atgttattttcagaagccagcaaaaaattcatggagatggaatcgacaacgaagaggctt gaactcacatcaatactgggttcattgcttgaaaatgcaggggatgacctgaaggaactg gtatatttaatacagggcaagctggcaccggattatgagggtatagaatttggagtttcg gggaagcttatagtgaaatcccttgcagccatatccggaatggatgaggaagaagtcaac aaattgttttacaagaatggcgaccttggtataactgcctctgaaatcagggaaaaaatg gaacagaagccacttttcagggaagaccttaccgtacactatgtgtatacaaggcttatg gaacttgcaaaatcagcagggcatggaagtgtaaaggggaaaacagatatttatgcggac ctcatggtaaattcatatcctgaagatataaagtatattacgaggataatcatggggaaa ctcaggttaggcgttgcagattccacaatacttgattccctggtgcatgcatttttctct aaagataatgcggatatggtagaaacagcttacaattttcatccagacatagggcttata gcaacgctcctgcagaaaggcgatataaaggccataagcaacataggccctgagccattg attccattcaaggtaatgcttgcagaaaggctgaggtccatcgatgatataagggaaaaa atgaaccaccacgtatcatttgagtataaatatgatgggctcaggacagagttgcacaaa aaaggggataaaattaagattttttcaagagggcttgaggaaacaactgaaaatttcccg gatattatagaaaatttcaaaaagagctattcatttgaatccataataattgatggagaa tcggttccgtttaatcccgatacaggggaattgttcccattccagatggtttccaaaagg aggggaagaaaatatcagattacagaaaaatccactgaaataccccttgttatgtttatt tttgatatacttgagctcaatggaaggatacttgttaacctcccatacgaagaaaggcgt aaaattcttgaagaaaattttgtagataatgagcactttaggctggcaacaagattgtcc tcggatgattctgaagagattaacaaattctttgaacagagcatagaggatgggtgtgaa ggcattgttgcgaaggatacatctgatgaatctgtttaccgtgcaggggctcgtgggtgg ctttggataaaatttaaaagggattatcagaaagaacttgcggattccatggacctggta attatcggtgcatttaatggccgtggaaggagggcaggggcatacggtgcactcctcatg gcatcatataacgaagaaacacatgcattcgagtcagtcacaaaactgggaacaggattc agtgatgaggtattattttcattgccaaaaatgctctctgatcttgtaagagaccacaaa cctgctatggttgaatcaaaaatggttcctgacatctggatatatccacagatagttatg gaaatccagggagcagaaattactgtaagccctatacatacatgtgcttttggaaaaata gagaaagattccggccttgcgttaagatttcccagattaattaaaatacgtgacgataaa aacgctgaagacgctacaactaccaatgaaattatagaactttataaaatgcagaaaaaa acaaaataa

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