KEGG   Flavobacterium album: HYN59_12360
Entry
HYN59_12360       CDS       T06577                                 
Symbol
ligD
Name
(GenBank) DNA ligase D
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
falb  Flavobacterium album
Pathway
falb03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:falb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    HYN59_12360 (ligD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:falb03400]
    HYN59_12360 (ligD)
Enzymes [BR:falb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HYN59_12360 (ligD)
DNA repair and recombination proteins [BR:falb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     HYN59_12360 (ligD)
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: AWH85846
UniProt: A0A2S1QZN5
LinkDB
Position
complement(2751786..2754590)
AA seq 934 aa
MKKLSEYNRKRDFDKTKEPEGKVKKSGKELHFVVQKHDASRLHYDWRLEINGVLVSWAVP
KGPIADTSVKRLAMHVEDHPMDYIDFEGTIPKGQYGGGTVMVWDTGTYLAEGSDDVAESE
KMLRKMHKDGNIKVVMHGKKLKGSYHLVRMSGKEDEWLLLKGKDEYADKREFDQHSVLTG
RTLEEIENDNKSEVWQSNREEKKSFHGDVDHILDEEPEKSSQSQSKSKSKPTAKKKTKAT
EKTETLTSTKNSPTFTAEDVAAAKVRKTFPKEWKPQLATLADAIFDSDEWVFENKYDGYR
ALIQIHKGKVELVSRNSLSFNSKYKELVEAFSIIKDDMILDGEIVVEDEKGLSHFQWLQY
FAENPNRGKLKCYVFDILYFNGYDLTSLELLQRKRILEAVLPQTDEIIYSGHIAGEGTKA
MKEAEAKGTEGLIAKKITSHYHVNKRSKEWLKIKVTKEQEMVIGGFTEPKGSRSGFGSLL
LGYYEGNDLIYTGKVGTGFNEDSLKDMYEKLTALVQKTSPFKVKPREPKVHWIKPELVAQ
IKYSEWTETNSLRHPVFIALRTDKKPKDVKKEIATPTDKVVPEEKGKKEVKKTKAIEKAE
ESTITKTSAKAKEKPADETKTGTPKAKTVTKKKSKTGKPGWDTEKVEVTHPEKVFWPKEG
YTKGDVINYYDEMAKWILPYIKDRPQSMRRTPNGIDHEGFFQKNVAGSAPDWAQTEKIHS
DSTDEDIEYLICNDKETLIYMANLGCIEINPWSSRLGSLDNPDYIIFDLDPNETTMENLV
TTAKKVKEILDTLGIKGYLKTSGGKGLHIFIPIKPKYTYEQSRDFSHIISQAVNNALPKI
TSLERMPKKRIGKVYLDFLQNGKGKTMSCAYSLRPRDGATASTPLEWEELDEKNFTVKNY
NIKTLPERVKEKGDLWEDFFDNAVDLKELLDKLG
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgaagaagctatctgaatataaccgcaaacgtgatttcgacaagacaaaggaacctgaa
ggtaaagtaaaaaagtcgggaaaggaactgcattttgttgtacagaaacatgatgcttcg
cggcttcactatgactggaggctcgagatcaatggcgtgctggtaagctgggcggtacca
aaagggcctattgcggatacttcggtaaagcggcttgccatgcatgtggaagaccacccc
atggactatattgattttgaaggtacgatacccaaagggcaatatggcggcggtaccgtg
atggtatgggatacggggacttatctggcagaaggttcagatgacgtggcggagagtgag
aagatgctcaggaagatgcataaggatggtaatattaaagtcgttatgcatggcaaaaag
ctgaaaggctcctatcacttagtccgtatgagcgggaaagaggacgaatggctgctgcta
aaaggcaaggatgaatatgcagataaaagggaattcgaccagcattcggtacttacaggg
cgaacgctggaggaaattgaaaacgacaacaaatcggaagtatggcaaagcaacagggaa
gaaaaaaagagcttccacggcgatgtagatcatatcctcgatgaagaacctgagaagagt
tctcagtctcagtcgaaatcaaagtcaaagccgacagcaaaaaagaaaactaaagctact
gaaaaaactgagactttgacttcgactaaaaactcccccactttcacagccgaagatgtg
gccgctgccaaagtccgcaagaccttccctaaggaatggaaaccacagctggcaacactg
gccgatgccatttttgatagtgacgaatgggtattcgaaaacaaatatgacggctatagg
gccctgattcaaatacacaaagggaaggttgaattagtatcccgtaatagcttgtcattc
aattcaaaatacaaggaactggttgaagcctttagtattataaaagacgatatgatcctg
gatggcgagatcgttgtggaagatgaaaaagggctgagccatttccaatggctgcagtat
tttgccgagaaccctaatcgcgggaagttgaaatgctatgtgttcgacattttgtatttt
aacggttacgaccttacttcactggaattgctgcaacgcaagcgtatactggaagctgtg
cttccgcaaacggacgagatcatttattccggacacattgcaggcgaaggcacaaaagcc
atgaaagaagctgaagcaaagggcacggaagggcttatcgcaaaaaagataacctcccat
taccatgtgaacaagcgcagcaaggaatggctgaaaataaaagtcaccaaagaacaagag
atggtgataggcggttttacggaaccaaagggttcccgcagtgggttcggttccctcctg
ctgggttattatgaaggcaacgacctgatttataccggtaaggtaggaacaggatttaac
gaagactcgttaaaggatatgtatgaaaaactgacggctttggtacagaaaacatcgcct
tttaaagtaaaaccgagagagccaaaagtacactggataaagccggaactcgttgcccag
ataaaatactcggagtggacagagaccaacagcctgcgccatcctgtatttatcgcgcta
cgtaccgataaaaaaccaaaagacgtgaaaaaagaaattgcgacacctaccgataaagta
gttcctgaagagaaaggaaaaaaagaagttaaaaagacgaaggctatcgaaaaagctgaa
gaaagcacaataacaaaaacttcggcgaaagctaaagaaaagcctgctgatgaaactaaa
accggaacaccaaaagctaaaacagtcacaaaaaaaaaatccaaaacaggtaagcccgga
tgggacaccgaaaaagtcgaggtaacccatcctgagaaagtattttggccgaaggaaggt
tataccaagggcgatgtgatcaattactatgatgaaatggcgaagtggatattaccgtac
atcaaagacaggccgcagtcaatgcgcaggacaccaaatgggattgaccatgagggattc
tttcaaaagaatgtagccggctccgcaccggactgggctcaaacggagaagatccattct
gattctaccgatgaggatattgaataccttatctgcaatgataaagagacgctgatttac
atggccaatttgggctgcattgaaatcaacccatggagcagccgcttaggttcgctggat
aatcctgactatattatcttcgacctggatcccaatgaaaccaccatggaaaaccttgtt
actacggcaaaaaaggtgaaagagatactggatacgcttggcattaaaggctaccttaaa
acctcgggtggcaaagggcttcatatttttatccccatcaagcctaaatatacttacgag
caaagccgtgatttttcgcatattatcagccaggcagtaaataatgcactgccgaaaata
accagcctggaacgtatgcctaaaaaacgcattggcaaggtgtacctcgacttccttcaa
aacgggaaaggtaaaaccatgtcctgcgcctattccctccgaccgcgagatggcgctaca
gcaagcacaccattagaatgggaagaactggatgaaaagaattttacggtaaagaattac
aacatcaagacactgccggaacgggtaaaagaaaaaggcgacttatgggaagactttttt
gataatgctgtagatctgaaggagctgttggataagttggggtag

DBGET integrated database retrieval system