Rhodobacteraceae bacterium SC52: G5B39_04115
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Entry
G5B39_04115 CDS
T06457
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq00521
Streptomycin biosynthesis
faq00523
Polyketide sugar unit biosynthesis
faq00541
O-Antigen nucleotide sugar biosynthesis
faq01100
Metabolic pathways
faq01110
Biosynthesis of secondary metabolites
faq01250
Biosynthesis of nucleotide sugars
Module
faq_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
G5B39_04115 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G5B39_04115 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G5B39_04115 (rfbC)
Enzymes [BR:
faq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
G5B39_04115 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QIE42823
UniProt:
A0A858CP82
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Position
complement(836390..836953)
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AA seq
187 aa
AA seq
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MQVELTDLPGVLHLTPRRFGDDRGFFSEVYNKDVMASHGVDVTFVQDNHSLSREVGVVRG
LHFQAPPHAQDKLVRCGAGRVMDVAVDIRKGSPHYGKWVAYELSAAAGNQLFIPKGFLHG
FSVLEPDSELLYKCSDVYAPDCDGAVRFDDPDLGIDWGVEVASAILSAKDAAAPLLKDFD
SPFVFED
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagttgagttaacggatctgcctggggttcttcatctgacgccgcggcgttttggg
gatgatcgaggttttttctctgaggtgtacaataaggatgtcatggcctctcacggggtt
gatgtgacgttcgttcaggacaatcactcgttgtcgcgcgaggttggtgttgtgcggggg
ctgcattttcaggcaccaccccatgcgcaggacaaactggtgcggtgcggcgcgggccgg
gtgatggatgtggctgtcgatatccgcaagggatcgccccattacggcaaatgggttgcc
tatgaactatctgctgcagccggcaaccagttgttcattcccaaagggttcctgcatggc
ttctctgttctcgaaccagacagcgaactcttgtataaatgttctgacgtctacgcgccg
gactgcgacggggccgtccggttcgacgatcccgatctggggatcgactggggtgtcgag
gtcgcaagcgcgatcctgtcggcaaaagatgccgccgccccgcttctaaaggactttgac
agtccgtttgtgtttgaggactga
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