Aureibaculum algae: FF125_20730
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Entry
FF125_20730 CDS
T06009
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
fbe
Aureibaculum algae
Brite
KEGG Orthology (KO) [BR:
fbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbe03400
]
FF125_20730
Enzymes [BR:
fbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FF125_20730
DNA repair and recombination proteins [BR:
fbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FF125_20730
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QCX40747
UniProt:
A0A5B7U162
LinkDB
All DBs
Position
complement(4909960..4912692)
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AA seq
910 aa
AA seq
DB search
MQSFLDRVVIDILSKTEDSTDLTFVLPSKRAGIFLKNILKSKLKKATILPKIISIEEFIE
ELSGINAIDSTTLLFEFYSVYIASTEEAKVESFENFTKWAPLLLQDFNEIDRHLVDAKHL
FSYLTDIKRIETLLKGEQKTDLILNQVKFYEKFESYYDRLYSYLIESKIAYQGLQYREAA
ENIEWYINNSSDKLVLVGFNALNKAEEKIFKGLLDSDIATIYWDIDAFFIKNNPQVATFI
NRYKSDWNYFEKNDFHWTCNEFSNKKNIKIIGTPKDISQIKYAGEILREISNTSNNFSDT
ALVLAEESMLGASLNSLPNEVKSVNITMGYELKNIPLGNLFDYLFKLQIHHKNGAFYYKE
VISVLNHPQVKSLFKTPEIIDRLLYNIAANNFTYLSKSSLLKLADNNSEYKELSFLFENW
KNDANVAVDYCIRFIELARENESLNSLEKEYLFRFYTIFQQLLNLNEKFGHITDIKTLNV
FYNQMLKSEKLSFQGEPLSGLQVMGVLETRVLDFKNIIITSVNEGVLPGGKSDNSFIPFD
IKQEVGLPTYKEKDAIFAYHFFRLIQRAENIYAIYNTEADSYGSGEQSRFLTQLEIFKKD
EVEKLVVAPDVVKTNFEFKEIKKDEFVNDELKTLANKGFSASTLTNYILNPLEFYNQKIL
RIREIEEVEETIAANTLGTIIHKTLEAFYEPYINEILKEEHLLQMKSKVASEVQKWFNQV
YNNGNISTGKNLLVYNVAKQFVNNFLKQELKLVKQGDNLKVLALEKKLELEIEIDGINFP
IKLVGEADRIDELNGTLRIVDYKTGKVLQNDLNINDWSQITKDYKKHSKSFQVLFYALLY
SKSENLDIDKQPLESGIISFKNLKAGFLKVNKSLVTQKDIELFENELKRLLLEIFDVNIS
ILEKESPFTN
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagttttctagatagagttgtaattgatatcctttcaaaaactgaagatagtaca
gatcttacttttgtattaccgagtaagagggcaggaatttttttaaaaaatatactgaag
tcaaaattaaagaaggcaacaatacttcctaaaataataagtattgaagaatttatagaa
gagttatcaggaattaacgcaatagatagtactacattattatttgagttctactccgta
tatatagcatcaacagaagaagcaaaggtagaaagttttgaaaattttaccaaatgggct
ccattactcttacaagattttaatgaaattgacagacatcttgttgacgcaaagcattta
ttttcatatctcacggatattaaaagaatagaaaccttattaaaaggtgaacaaaaaacc
gatttaattttaaatcaggttaagttctatgaaaaatttgaaagctattatgatagactt
tattcatacttaattgaaagtaaaattgcatatcaaggtttacagtacagagaagctgca
gaaaatattgaatggtatatcaataattcatcggataaactagtactcgttggttttaat
gctttgaataaggcagaagaaaaaatatttaagggtttgcttgatagtgatatcgccact
atttattgggatattgatgcgttttttataaaaaacaacccacaagttgctacattcatt
aatagatataaaagtgattggaactattttgagaaaaatgattttcattggacttgcaat
gagttttcaaataaaaaaaatattaaaataataggaactccaaaggatatttcacaaata
aagtatgcaggtgaaattttaagggaaatttcaaataccagtaataatttttcagatact
gctttagtcctagcagaagaatctatgcttggtgcatcattaaattcattacctaatgag
gtaaagagtgttaatattaccatgggttacgagcttaaaaatattccccttggtaatcta
tttgattatttatttaaacttcaaattcatcataaaaacggagcattctattataaagaa
gtgatatccgttttaaatcatccacaggtaaaatctttatttaaaacacctgaaatcatt
gatcgtttgctctataatattgccgccaacaattttacttacctctctaaatctagccta
ttaaaattggcagacaacaattctgagtataaagaactctcatttctatttgagaattgg
aaaaatgatgccaatgtagcggtcgattattgtattcggtttattgagctggctagggaa
aatgaaagtttgaattcactggaaaaagaatatttatttagattttatactatttttcag
caattgttaaacctcaatgagaaatttgggcatattactgatattaaaacgcttaatgta
ttttataatcaaatgcttaaatcagaaaagttatcttttcaaggtgaacctttgtcaggt
ttacaagtaatgggggtattagaaacacgtgtacttgattttaaaaatataattataacc
tcagtaaatgaaggcgtattgccaggaggtaagtcagataattcatttatcccatttgat
ataaaacaagaggtagggttgccaacctataaagaaaaagatgcaatttttgcgtatcac
ttttttagattaattcaaagagcagaaaacatatatgctatttataatacggaagcggat
agttatggttctggtgagcaaagccgttttttaacacaattagaaatatttaaaaaagat
gaagttgaaaaattagttgtagcacctgacgtggttaaaactaattttgaatttaaagaa
attaaaaaggatgaatttgtaaatgatgaattaaaaaccttggcaaataaaggcttttcg
gcatcaacacttacaaattatatactaaacccactagagttttataatcaaaaaatatta
agaattagggaaattgaagaggtagaggaaacaattgcggcaaataccttaggaacaatt
atccataaaacattagaagcgttttacgagccttatattaatgaaatattgaaagaggag
catttgcttcaaatgaaatcaaaagtggcttcagaggtccaaaaatggtttaatcaggtg
tataataatggaaatatttctacaggtaagaatttgttggtatataatgtggcaaaacaa
tttgtaaataattttttaaagcaggaattaaaacttgttaaacaaggggataatcttaag
gttttagctttagagaaaaaattagaattagaaatagaaattgacggaattaattttcct
ataaaactggttggcgaagcagatagaattgatgaacttaacggaacattaagaatagtt
gattataaaactggtaaagtactacagaatgatttaaatattaatgattggtctcaaatt
acaaaagattataaaaagcatagtaaaagttttcaggtacttttttacgccttgttgtat
tctaaatctgaaaatttagatattgataaacaaccactggaaagtggtattatttctttc
aaaaatttaaaggcaggctttttaaaagtgaataaatccttagtcactcaaaaagatatc
gagcttttcgaaaatgaattaaaacgtttacttttagaaatatttgatgtcaatatttct
attttagaaaaagaatcaccatttacaaattga
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