KEGG   Abyssalbus ytuae: MQE35_01265
Entry
MQE35_01265       CDS       T08292                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
fbm  Abyssalbus ytuae
Pathway
fbm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:fbm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MQE35_01265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fbm03021]
    MQE35_01265
Transcription machinery [BR:fbm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MQE35_01265
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 HTH_38 HTH_24 GerE HTH_20 DUF2774 HTH_28 HTH_40 Sigma70_ECF TnsD HTH_36 HTH_30 HTH_10 RPA_C HTH_7 Dimerisation2-like_dom Flagellin_N
Other DBs
NCBI-ProteinID: UOB17942
UniProt: A0A9E6ZLE5
LinkDB
Position
325746..326309
AA seq 187 aa
MSEKALHNEKLLVKQLIAGNEKAFIKLYNTYKNTIYGYSLKLVKSNADAEEIIQDVFMKV
WEKRKTLDPSLSFKSYLFTVARNTCFNFLRKSSNDAKMKEKIFYKSQKSFEPADRKLIAS
EFERLKNGAYDKLPPKRRAIFEMSREEGMSYPEIAKKMGISVNTVKVQMSKALETLRDFL
KTIQVFL
NT seq 564 nt   +upstreamnt  +downstreamnt
atgtcagaaaaagccttacataatgaaaaattattggttaaacagctcattgctggcaat
gaaaaggcattcattaaactttataatacctataagaacactatttacggatatagttta
aaattggtcaaatccaatgcagatgctgaagaaataatacaggacgtttttatgaaagta
tgggaaaagaggaaaacactggatccttcgctttcttttaaatcatacttgttcactgtg
gcgcgtaatacttgcttcaattttttgagaaagtcttctaacgatgcaaagatgaaagag
aagatattttacaaaagtcaaaaatcatttgaacctgctgacagaaaacttattgcttct
gaatttgagcgtttaaagaatggagcttatgataaactcccccctaagagaagagcaatt
tttgagatgtctcgtgaggaagggatgtcttatcccgaaatagctaaaaaaatgggtatt
tcagtaaacacagtaaaggttcaaatgagtaaggcactggaaacattacgcgatttttta
aaaactattcaggtgtttctttag

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