Abyssalbus ytuae: MQE35_16540
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Entry
MQE35_16540 CDS
T08292
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fbm
Abyssalbus ytuae
Pathway
fbm03420
Nucleotide excision repair
fbm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MQE35_16540
03430 Mismatch repair
MQE35_16540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fbm03400
]
MQE35_16540
Enzymes [BR:
fbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MQE35_16540
DNA repair and recombination proteins [BR:
fbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MQE35_16540
MMR (mismatch excision repair)
Other MMR factors
MQE35_16540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
DUF5604
Motif
Other DBs
NCBI-ProteinID:
UOB17331
UniProt:
A0A9E7A0C5
LinkDB
All DBs
Position
3955364..3957694
Genome browser
AA seq
776 aa
AA seq
DB search
MEKYLEELNEAQKAPVLHKEGPLMVIAGAGSGKTRVLTFRIAYLMEQGVDPFNILALTFT
NKAAREMKKRIAQIVGASEAKNLWMGTFHSIFAKILRFEADKLGYPSNFTIYDTQDSQRL
IGAIIKEMGLDKDIYKYKQIQNRISSFKNSLITVRAYYNNPELVEADAMAKRPRVGEIYE
AYCDRCFKAGAMDFDDLLLKTNELLTRFPEVLMKYQERFKYILVDEYQDTNHSQYLIVKA
LSDRYQNICVVGDDAQSIYAFRGANINNILNFQRDYDDVKVYRLEQNYRSTKNIVNAANS
VIEKNKQRLDKNVWTANDDGSFIKVQRSITDAEEGRFVASSIFENKMQYQLSEGDFAVLY
RTNSQSRAIEDALRRKDIPYRIYGGLSFYQRKEIKDVLCYLRLVLNPKDEEALVRIINFP
TRGIGQTTMEKLTVAANHYKRSVFEVMENLDKIDLKINTGTKTKLDNFVTMIKSFQIINK
ESDAFTVAEHVVKKTGILQEFKKDGTPEGIARMENIEELLNGIKDFIEGQKELADANGSL
AEFLEDVALATDLDKDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQSRYRWGKLIDAEPSRFIEEIDDKYLEYLTPPLDAG
YRYKPLIDADIFGEVDKSKLRLKRPVAGTPPSYKKPSEEKLRKLRKLKPGLDQPVENNNL
FDNDLSVGNKVEHSRFGKGEIIKIEGVGNDKKAEIKFENGGIKKLLLRFARLKVIG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagtatttagaggaattaaatgaggcacagaaagctcccgttttgcataaggaa
gggccgttaatggttattgccggggcaggatcgggaaaaacaagggtattgacgtttcgt
atagcgtatttaatggagcagggggtagacccttttaatatcctggcgctcacttttaca
aataaagctgcccgtgagatgaaaaagcgtattgcccagattgtaggggcaagcgaggca
aaaaatctttggatggggacattccactctatttttgcaaaaatcttacggtttgaagca
gataagttaggttacccaagcaattttacaatatacgatacccaggattcccaaaggttg
ataggtgcgattattaaagagatggggcttgataaggatatttataaatacaaacaaata
caaaacaggatatcgtcgtttaaaaacagtttaataaccgtaagggcttattataataac
cccgaactggtagaggctgatgccatggccaagcgcccccgggtaggagaaatttatgaa
gcttactgcgatcgttgtttcaaagcaggtgcaatggattttgatgaccttctccttaaa
accaatgagttacttacccgtttccctgaggttttaatgaaataccaggaaaggtttaaa
tatattttggtagatgagtaccaggatactaatcattctcaatatcttattgtaaaagct
ttgagtgaccgttaccagaatatttgtgtggtgggtgatgatgctcagagtatttatgcc
ttcaggggggccaacattaataatattttaaattttcaaagggattatgacgatgtaaag
gtatacaggcttgaacaaaattatcgttcaaccaaaaatattgtaaatgcggcaaattca
gttatagaaaaaaataaacaaaggttagataagaatgtatggactgccaatgatgacggt
tcttttataaaagtacaaagatcaataaccgatgccgaagaagggcgttttgtagcttca
tctatttttgaaaataaaatgcaatatcagctatccgagggagattttgccgtattatac
agaacaaattctcaatcgagggctatagaagatgctttaagaagaaaagatattccctat
aggatttatggagggctttctttttaccagcgcaaggaaataaaagatgttttatgttat
ctgcgattggtacttaatcctaaagatgaagaagcactggtacgaatcataaattttccg
accaggggcataggccagacaacaatggagaagttaacggtagcagccaatcattacaaa
cgttccgtttttgaggtgatggaaaacctggataaaattgatcttaaaataaatacaggt
accaaaacaaagctggataattttgtgaccatgattaaaagctttcagattatcaataaa
gaatcagatgcttttacagtggctgaacatgtggttaaaaaaacagggatactccaggag
tttaaaaaagacggcactccggaaggaattgcccggatggaaaatatagaagaactctta
aacggtattaaggattttattgaaggacaaaaagaactggctgatgccaacggttctttg
gctgaatttctggaagatgttgcgctggccacagatcttgataaagataccggtgatgat
gaccgggttgctttaatgacaattcaccttgcaaagggactggagtttccttatgtgtat
attgtaggaatggaagaagatttatttccctcggctatgagtatgaatacccgaagtgaa
ctggaggaggagagaaggttgttttatgtagcgttaaccagggccgagaaacaggcgtat
ttaacttatacacaaagcaggtaccgctggggaaaacttattgatgctgaacccagcagg
tttattgaagagatagatgataaatacctggagtatttaaccccgccgttagatgccggt
taccggtataagccgcttattgatgcagatatatttggcgaagtagataaaagtaaactc
cgcttaaaaaggcctgtggcgggtacaccaccatcttataagaaaccttcggaagaaaag
ttgcgtaaattgcgtaaactaaaacctggtttagaccaaccggtagagaataataatttg
tttgacaatgatttatcagttggaaataaagtagaacattcccgctttggaaaaggagaa
atcataaagattgaaggggtgggaaatgataaaaaagccgaaataaaatttgagaacggt
ggtataaaaaaacttcttttacggtttgcaaggttgaaggtgattggttag
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