Felis catus (domestic cat): 101094730
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Entry
101094730 CDS
T02385
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
fca
Felis catus (domestic cat)
Pathway
fca03022
Basal transcription factors
fca03420
Nucleotide excision repair
fca05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101094730
09124 Replication and repair
03420 Nucleotide excision repair
101094730
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101094730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fca03021
]
101094730
03400 DNA repair and recombination proteins [BR:
fca03400
]
101094730
Transcription machinery [BR:
fca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101094730
DNA repair and recombination proteins [BR:
fca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101094730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
101094730
NCBI-ProteinID:
XP_011282194
EnsemblRapid:
ENSFCTG00005013716
UniProt:
M3X5N0
LinkDB
All DBs
Position
A1:135973179..136012663
Genome browser
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKATKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSGSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEHNGERFCYGCQGELKDQHVYVC
AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPTSSGI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacctgaaagaactaagcgatgggaaggaggctatgaaaggacatgggag
attcttaaagaagatgaatcaggatcacttaaagctacaatagaagatattctcttcaaa
gcaaagagaaaaagagtgtttgagcaccatggacaggttcgacttggaatgatgcgtcat
ctttatgtggtagtagatggatcaagaacaatggaagaccaagatttaaagccaaataga
ttgacttgtactttaaagttgttggaatacttcgtagaagagtattttgatcaaaatcct
attagtcagattggaataattgtaacaaagagtaaaagagctgaaaaactgaccgaactc
tcaggaaacccaaggaaacacattacatctttgaagaaagctgtagatatgacctgccat
ggagaaccgtctctctataactcattaagcatggctatgcaaactctaaaacacatgcct
ggacatacaagtagagaagtgctaatcatctttagcagcctcacaacttgtgacccatct
aatatctatgatctaatcaagaccctaaaggcaactaaaattagagtgtctgttatcgga
ttgtctgcagaggttcgggtttgcactgtacttgctcgtgaaactggtggcacataccat
gttatcttagatgaaagccattacaaagaattgctgacacatcatgtcagtcctccacct
gctagctcaggttctgaatgctcacttattcgtatgggatttcctcagcataccattgct
tctctgtctgatcaagatgcaaaaccctctttcagcatggcgcacttggatagcaacact
gagccaggacttacattaggaggatatttctgcccacagtgtcgagcaaagtactgtgaa
cttccagttgaatgtaaaatctgtggtcttactttggtgtctgctccccatttggcacgg
tcttatcatcatttatttcctttggatgcttttcaagagattcctctagaagaacataat
ggagaaagattttgttatggatgtcagggggaattaaaagaccagcacgtctatgtttgt
gctgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcacgattctctccac
tgctgtcctggctgtattcataagattccaacttcttcagggatttga
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