Felis catus (domestic cat): 101098263
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Entry
101098263 CDS
T02385
Symbol
COL27A1
Name
(RefSeq) collagen alpha-1(XXVII) chain isoform X5
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
fca
Felis catus (domestic cat)
Pathway
fca04820
Cytoskeleton in muscle cells
fca04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
fca00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101098263 (COL27A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101098263 (COL27A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fca00536
]
101098263 (COL27A1)
Glycosaminoglycan binding proteins [BR:
fca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101098263 (COL27A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
101098263
NCBI-ProteinID:
XP_019671959
EnsemblRapid:
ENSFCTG00005008513
LinkDB
All DBs
Position
D4:74079319..74220134
Genome browser
AA seq
1844 aa
AA seq
DB search
MPLGARGRTDRPASQLGTQGFLFTWILVSFVCHLASTQGAPEDVDVLQRLGLSWTKAGGG
RSPPPPGVIPFQSGFIFTQRTRLQTPTAAVIPASLGTELALVLSLCSHQVNHAFLFAVRS
RKHKLQLGLQFLPGKTVLHLGPRRSVAFDLDVHDGRWHHLALELRGRTVTLVTACGQHRV
PVPLPFHKDPALDPEGSFLFGKMNPHAVQFEGALCQFSIYPVTQVAHNYCTHLRKQCGQA
DTYRPQLGPLLPRDPGATFSFQTNLALRGLGNLTTAAPALGSRPASRDPRGTVVPATPTK
PLRTSITDPHQRAAARGPARTPLPPAKLSAGEVLPPVPPASRAASATPVQPLQKSTATGS
PRRHPARLSATPPSTGPVKNPRPTQKAARPSFTKSAPPTKKPVPSTSHPLPAKASRPSVR
PIQRTPVTPRPPLPDAQTLLLATGSSKTPFSPVGQNEAKMSRHASEPATAHTSTLRPPQP
TVLSLSPVPRPDSTGTTPPPATSLPPTLAPGSGPTRTKKPSGSEATRKARPKSSPRKPVP
LRPGKAARDVPLNDPTTRPSPRQSRPSRPTTSAPAFAPARFLSSSPWPTSHSYSFFHLAG
PTPFPLLMGPPGPKGDCGLPGPPGLPGLPGPPGARGPRGPPGPYGNPGLPGPPGAKGQKG
DPGLSPGKAHDGAKGDVGLPGLSGNPGPLGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKG
YPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPGDFG
ERGPPGLDGNPGELGLPGPRGVPGLIGDMGALGPTGYPGPKGLKGLMGNMGEPGLKGDKG
EQGVPGVSGDTGFQGDKGSQGLPGFPGARGKPGPLGKVGDKGSLGFPGPPGPEGFPGDIG
PPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGRPGLDG
VKGEPGDPGRPGPVGEQGLLGFIGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPGTPG
AVGTPGEPGPRGPPGSRGPPGMRGAKGLRGPRGPDGPAGEQGSRGLKGPSGPQGRPGQPG
QQGAAGERGHSGVRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPLGPPGEMGPQGPPGAVG
EPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDGGPAGPDGLKGDRGDPGPDGERG
DKGQEGLKGEDGPPGPPGITGVRGPEGKPGRQGEKGRTGAKGAKGYQGQLGEMGVPGDPG
PPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHKGVMGPLGPPGPKGEKGEQGEDG
KAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGDPGQQGLPGHPGPRGRPGPK
GSKGEEGPKGKQGKAGAPGRRGIQGLQGLPGPRGVVGRQGPEGMAGPDGFPGRDGQAGQQ
GEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPSGKRGTAGGTGLP
GNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGLKGIQGPRGSPGLMGKEGIIGPL
GILGPSGRPGPKGDKGSRGDLGLQGPRGPPGPRGRPGPPGPPGSPIHFQQDDLGAAFQTW
MDTNGALKVEGYSHPDRLVLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDLMDC
EQKMVDGTYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKVEFAVSRVQMNFLHLLS
SEVTQHITIHCLNMTVWQEGTGQTPAKQAVRFRAWNGQIFEAGGQFRPEVSMDGCKVQDG
RWHQTLFTFRTQDPQQLPIVSVDNLPPASSGKQYRLEVGPACFL
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgccgttaggcgcccgaggaaggaccgaccgtccagcctcgcagctagggacccagggg
tttctcttcacctggatcttagtgtcatttgtctgtcacctggcctccacccaaggagct
cctgaagatgtggacgtcctccagcgtctcggcctcagctggacaaaggcagggggtggc
cggagccccccgcccccgggggtcattccgttccaatcaggcttcatcttcacgcagcgg
acccggctccagacccccacagccgccgtcattcccgcctccctgggcacagagctggct
ctggtgctgagcctctgctcccaccaggtgaaccatgccttcctcttcgccgtccgcagc
cggaaacacaagctgcagctgggcctgcagtttctccccggcaagacggtcctccacctg
gggccccggcgctcggtggcctttgacctcgacgtgcatgacgggcgctggcatcaccta
gctctggagctccgcggccgcaccgtcaccctggtgacggcctgcgggcagcaccgggtg
cctgtcccgctgcctttccacaaggacccagcactcgaccccgagggctccttcctcttt
gggaagatgaacccacacgcggtccagtttgaaggtgccctgtgccagttcagtatctac
cctgtgacgcaggtcgctcacaattactgtacccacctgagaaagcagtgtggacaggcc
gacacataccggccccagctgggacccctccttccccgagaccctggcgcaaccttcagc
ttccagaccaaccttgccctgcgaggcctggggaacctgaccactgccgcaccagccctg
gggtcgcggccagcaagcagggatcccagggggactgtggtgcctgccacacccaccaag
cccctaaggactagcatcacagaccctcaccagcgtgctgcagccaggggcccagcacgg
accccgctgccacctgccaagctgtcagccggtgaagtgcttcctcccgtgcccccagcc
tctcgtgccgcctccgccacacctgtccagccgttgcagaagagcacggccaccgggagc
cccagacgtcatccggctaggctttcagccactcctccttccacaggccctgtcaaaaac
ccccgccccacgcagaaggcagctcggccttccttcacaaagtcagccccccccaccaag
aagcctgtgccatccacctcccacccacttcctgccaaagcctcccgaccctccgtgagg
ccgatccagaggacccctgtaacgcccagacctccgctacccgacgctcagaccctactt
ctggccactggatcctccaaaacgcctttctccccagtgggccagaatgaggccaagatg
agtcgtcatgccagtgagccagccactgcccacaccagcaccctcagaccgcctcaaccc
actgttctgtccctgtcacctgtcccccgtcctgactctaccgggaccaccccaccacca
gccacatcgttgccgcccacccttgctcctggctcaggccccaccagaaccaagaaaccc
tctggatcagaagccacaaggaaagccagacccaagagcagcccccggaagcccgtcccc
ctcagacctgggaaggcagccagggatgtcccgttgaatgatccgacaacccggcccagc
cccagacagtcccggcccagccggccgaccacctcggccccggcatttgccccagcgcga
ttcctgtcctccagtccctggcctacaagtcacagctattcattcttccacctggcggga
cccacgcctttcccgttgctgatgggacctccagggcccaagggagactgcggtttgccg
ggtccccctgggctgcctgggctccctggaccccctggtgcacgggggcctcggggtcct
cctgggccttatggaaacccaggcctccccggccctcctggagccaaaggacagaaaggg
gacccagggctctcaccaggaaaggcccacgatggggcaaagggcgacgtgggcttgcct
gggctctctgggaatccaggacctcttggacgaaagggacacaagggctatcctggaccg
gcggggcaccctggagaacaggggcagccaggacctgagggcagcccaggggccaaaggt
taccctggcaggcaggggttacccggaccggtaggagaccctggccccaaaggcagccgg
ggctacattggactcccagggctcttcggcctgccggggtctgatggagagagaggcctg
cctggcgttcctggcaagaggggcaagatgggtaggccggggtttcctggagactttggg
gaaagaggccctcctggactggatggaaaccctggagagctgggcctgccagggccccga
ggagtccccggcctcattggcgacatgggagcactgggtccgactggctatccaggaccc
aagggcctgaagggactgatggggaacatgggggagcctggactgaaaggtgataagggt
gaacaaggggttcccggtgtgtcaggagataccggattccaaggagacaaggggagccag
gggttgccagggttcccaggcgcacgggggaagccagggcctctgggcaaagttggagac
aagggatcccttgggtttcctgggcctcctggccccgaggggttccccggagacatcggc
ccccctggggacaacggcccagaaggcatgaagggtaagcctggagctcgaggcctgccg
ggaccccgtgggcagctggggcccgagggagatgagggacccatggggccacccggggcc
cctggcttagagggccagcctggcagaaaggggtttcctggtaggcccggcctggatggc
gtgaagggagagccgggtgaccctggacggccagggccagtgggtgagcagggactgctg
ggattcattggtctggtcggggagccggggatcatgggagaaaagggtgaccggggcatg
atgggacccccaggcgcacctggacccaagggatcgatgggtcatcctggaactcccggt
gcggttgggacccctggagagcccggaccccggggtcctccaggatctcgaggtccacca
ggcatgaggggagcaaagggactccggggcccccgaggaccagatggaccagccggggag
cagggatccaggggcctcaagggcccttcaggacctcagggcagaccgggccagcccggg
caacagggtgcggccggtgagcgagggcactcgggagtgcgaggcttcccgggcatcccg
ggtccctcaggccctccgggcaccaagggcctcccaggagaaccgggccctcagggaccc
cagggaccacttggccctcctggagagatgggacctcaggggcctcccggtgcagtagga
gagccgggccttcctggggaagccgggatgaagggtgaccttgggcctctgggcacccct
ggggagcagggcctcattgggcagcggggagagccgggccttgagggtgacggtggccct
gcagggcccgatgggctgaagggggacagaggtgaccccgggcctgatggtgaacgtggt
gacaagggtcaggagggactgaagggcgaggatgggccccccgggccccctggcatcact
ggcgtccggggtcctgaaggaaaaccagggaggcaaggcgagaagggccggacaggagcc
aagggtgccaagggctaccaaggacagctgggtgagatgggcgtccctggagaccccgga
ccccctggcaccccaggccctaaagggtcccggggcagcctgggaccaacgggtgctccg
ggacggatgggggcccaaggagaaccgggactggctggttatgatggacacaaaggcgtc
atgggccccctcggacctcctggaccaaagggcgaaaagggggagcagggcgaggatggc
aaggccgaggggccccctgggccacctggagatcggggccccgtaggcgatcgaggagac
cgcggggagccaggggaccctggataccctgggcaggagggtgtgcaaggcctccgtgga
gacccaggccagcagggcctaccagggcatccaggaccccggggacgtccaggacccaaa
ggatcgaaaggggaagagggaccaaagggaaagcaaggcaaggcaggggcacctggacga
agggggattcagggcctgcaggggctgccagggcctcggggcgtggtggggagacagggc
cccgaggggatggctggaccagatgggtttcctggccgggatggtcaagcaggacagcag
ggggagcagggagatgatggggaccctggccccatgggccctgcagggaagagaggaaac
ccaggtgtggccggcttgcctggagcacaggggcccccaggattcaagggtgaaagtgga
ttgccggggcagctgggcccgtctggcaaacgagggacagcaggtggaaccgggcttcct
gggaaccagggggagcctggatccaaaggccagccgggcgactctggcgagatgggcttc
ccaggaatggccggcctctttggacccaagggccctcctggagacatcggcttgaaaggc
atccagggccctcgggggtcccccggcttgatgggaaaggaaggcatcattggccccctc
ggaatcctgggaccttcaggacgcccgggtccaaagggtgacaaaggcagccgaggggac
ttgggactgcaaggtccgaggggtcctcctggtcccagaggccggcctggcccaccgggt
cctccagggagccctatccactttcagcaagatgaccttggagcagctttccagacgtgg
atggacacaaatggcgcactgaaagtagagggttacagccatccagaccggctggtgctg
gaccagggaggggagatctttaaaaccttacactacctcagcaacctcatccagagcatt
aagacgcccctgggcaccaaagagaaccctgcccgggtctgccgagacctcatggactgt
gagcagaagatggtggacggtacctactgggtggatccaaaccttggctgctcgtccgac
accatcgaagtttcctgcaacttcacacatggtggacaaacgtgtctcaagcccatcacg
gcctccaaggtcgagtttgctgtcagccgggtccagatgaattttctgcacctgctaagc
tcggaagtgacacagcacatcaccatccactgccttaacatgaccgtgtggcaggagggc
acggggcagaccccagccaagcaggctgtgcgcttccgggcgtggaacgggcagatcttt
gaagcaggtggtcagttcaggccagaagtgtccatggatggctgcaaggtccaggatggc
cgctggcatcagacgcttttcaccttccggacccaggacccgcagcagctgcccatcgtc
agcgtggacaacctccctcctgcctcatcagggaagcagtaccgcctcgaagttggacct
gcgtgcttcctctga
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integrated database retrieval system
