KEGG   Flavobacterium channae: LOS89_03805
Entry
LOS89_03805       CDS       T08502                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fcb  Flavobacterium channae
Pathway
fcb03030  DNA replication
fcb03430  Mismatch repair
fcb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fcb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LOS89_03805
   03430 Mismatch repair
    LOS89_03805
   03440 Homologous recombination
    LOS89_03805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fcb03032]
    LOS89_03805
   03400 DNA repair and recombination proteins [BR:fcb03400]
    LOS89_03805
Enzymes [BR:fcb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LOS89_03805
DNA replication proteins [BR:fcb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LOS89_03805
DNA repair and recombination proteins [BR:fcb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LOS89_03805
SSDB
Motif
Pfam: RNase_T RNase_H_2 ExoX-like_C Rv2179c-like
Other DBs
NCBI-ProteinID: UGS24404
LinkDB
Position
889169..889939
AA seq 256 aa
MELKLTRPICFFDLETTGIDVARDRIVEISIYKVYPNGNKESKTWLVNPTIPIPPQTTAV
HGITDEKVANEPTFKELASQVHNMIKDSDLAGFNSDRFDIPLLAEELLRAEVDFDMKNRV
SVDVQTIFHKMEERTLSAAYKFYCGQSLENAHSAQADTMATYEILKAQLDRYENLENDMK
SLSEFTTRKKSVDFAGFIALNNEGKEIFTFGKHKGALVDDVFEKEPGYFGWIQNADFPLY
TKKVLTGIKLRKLNTK
NT seq 771 nt   +upstreamnt  +downstreamnt
atggaattaaaattaacacgcccaatttgtttttttgaccttgaaactactggaattgat
gtagctagagatcgaatcgtagaaatatctatttataaagtatatcctaacggaaataaa
gaaagtaaaacttggttagttaatcctacaattccaattccgcctcaaacaactgctgtt
catggaataactgatgaaaaggttgcaaatgaacctacgtttaaagaattagcatcacaa
gttcacaatatgattaaagattctgatttggctggattcaattcggacagatttgatatt
ccgttgttagcagaagaattattacgtgctgaggttgattttgatatgaaaaatagagtt
tctgtagatgtgcaaactatttttcataaaatggaagagcgtactttgagtgcggcatat
aaattttattgcggacaaagtttggagaatgcgcatagtgcacaggctgatactatggct
acttatgaaattttaaaagcacaattggatcgatatgagaatttagaaaatgatatgaaa
tcgttatctgaatttacaacaagaaaaaaatcagttgattttgcaggatttatcgcttta
aataacgaaggaaaagaaatttttacctttggtaaacataaaggagcattagttgatgat
gtttttgagaaagaacctggttattttggatggattcaaaatgcagattttccgttatac
actaaaaaagtactaactggaattaaattaagaaagttaaacacaaaataa

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