Flavobacterium channae: LOS89_03805
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Entry
LOS89_03805 CDS
T08502
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fcb
Flavobacterium channae
Pathway
fcb03030
DNA replication
fcb03430
Mismatch repair
fcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOS89_03805
03430 Mismatch repair
LOS89_03805
03440 Homologous recombination
LOS89_03805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcb03032
]
LOS89_03805
03400 DNA repair and recombination proteins [BR:
fcb03400
]
LOS89_03805
Enzymes [BR:
fcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOS89_03805
DNA replication proteins [BR:
fcb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOS89_03805
DNA repair and recombination proteins [BR:
fcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOS89_03805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
ExoX-like_C
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UGS24404
LinkDB
All DBs
Position
889169..889939
Genome browser
AA seq
256 aa
AA seq
DB search
MELKLTRPICFFDLETTGIDVARDRIVEISIYKVYPNGNKESKTWLVNPTIPIPPQTTAV
HGITDEKVANEPTFKELASQVHNMIKDSDLAGFNSDRFDIPLLAEELLRAEVDFDMKNRV
SVDVQTIFHKMEERTLSAAYKFYCGQSLENAHSAQADTMATYEILKAQLDRYENLENDMK
SLSEFTTRKKSVDFAGFIALNNEGKEIFTFGKHKGALVDDVFEKEPGYFGWIQNADFPLY
TKKVLTGIKLRKLNTK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaaattaacacgcccaatttgtttttttgaccttgaaactactggaattgat
gtagctagagatcgaatcgtagaaatatctatttataaagtatatcctaacggaaataaa
gaaagtaaaacttggttagttaatcctacaattccaattccgcctcaaacaactgctgtt
catggaataactgatgaaaaggttgcaaatgaacctacgtttaaagaattagcatcacaa
gttcacaatatgattaaagattctgatttggctggattcaattcggacagatttgatatt
ccgttgttagcagaagaattattacgtgctgaggttgattttgatatgaaaaatagagtt
tctgtagatgtgcaaactatttttcataaaatggaagagcgtactttgagtgcggcatat
aaattttattgcggacaaagtttggagaatgcgcatagtgcacaggctgatactatggct
acttatgaaattttaaaagcacaattggatcgatatgagaatttagaaaatgatatgaaa
tcgttatctgaatttacaacaagaaaaaaatcagttgattttgcaggatttatcgcttta
aataacgaaggaaaagaaatttttacctttggtaaacataaaggagcattagttgatgat
gtttttgagaaagaacctggttattttggatggattcaaaatgcagattttccgttatac
actaaaaaagtactaactggaattaaattaagaaagttaaacacaaaataa
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