Flavobacterium channae: LOS89_13005
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Entry
LOS89_13005 CDS
T08502
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
fcb
Flavobacterium channae
Pathway
fcb00521
Streptomycin biosynthesis
fcb00523
Polyketide sugar unit biosynthesis
fcb00541
O-Antigen nucleotide sugar biosynthesis
fcb01100
Metabolic pathways
fcb01110
Biosynthesis of secondary metabolites
fcb01250
Biosynthesis of nucleotide sugars
Module
fcb_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LOS89_13005 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LOS89_13005 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LOS89_13005 (rfbC)
Enzymes [BR:
fcb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LOS89_13005 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UGS23658
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All DBs
Position
complement(2794839..2795390)
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AA seq
183 aa
AA seq
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MTFTETKLKGCFILEPKIFKDERGYFMESFNEKTFQEGIGQKVTFVQDNQSFSSRGVLRG
LHYQCGEHAQAKLVRVLQGEVLDVAVDLRPDSETFGQYEAVLLSAENQTQFFLPRGFAHG
FLVLSETATFFYKCDNFYNAASEGGILYNDETVNINWNFPTSELIISEKDQQLPNLLNAK
KVW
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgacatttacagaaaccaaacttaaaggatgttttatcctggaaccgaaaatatttaaa
gacgaacgtggttatttcatggagagttttaacgaaaaaacttttcaagaaggaataggt
caaaaagtcacttttgttcaagacaatcaatcgttttcaagtcgaggtgttttgagagga
ttgcattaccaatgtggcgaacacgctcaagccaaattagttcgtgttttacaaggcgaa
gttttagatgttgcagttgatttaagaccagattctgaaactttcggacaatatgaagcg
gttttgctttctgcagagaatcaaacccaattttttcttccaagaggttttgctcacgga
tttttggtgctttcagaaacagctactttcttttacaaatgcgataatttttacaacgca
gcaagtgaaggcggaatactatataatgacgaaactgtaaatattaattggaactttcca
acatctgaattgattatttcagaaaaggatcaacaattgcctaatcttttaaatgcaaaa
aaagtatggtaa
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