Flavobacterium cyclinae: LOS86_00340
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Entry
LOS86_00340 CDS
T08416
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc00521
Streptomycin biosynthesis
fcc00523
Polyketide sugar unit biosynthesis
fcc00541
O-Antigen nucleotide sugar biosynthesis
fcc01100
Metabolic pathways
fcc01110
Biosynthesis of secondary metabolites
fcc01250
Biosynthesis of nucleotide sugars
Module
fcc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LOS86_00340 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LOS86_00340 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LOS86_00340 (rfbC)
Enzymes [BR:
fcc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LOS86_00340 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UGS21106
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All DBs
Position
68773..69324
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AA seq
183 aa
AA seq
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MRFIETQLKGCFILEPKIINDERGYFMESFNAKTFQEGIGQNVTFVQDNQSFSTRGVLRG
LHYQCGEHAQAKLVRVLQGEVLDVAVDLRPESETFGQYEAVLLSSENQKQFFVPRGFAHG
FLVLSETATFFYKCDNFYNKESEGGLIYNDETLKINWDFPSQDLIISEKDQVLPNLQNAK
KVW
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagatttatagaaacccaactaaaaggatgttttatcctagaacctaaaataatcaat
gacgaaagaggttacttcatggaaagttttaatgcaaaaacatttcaagaaggaattgga
caaaatgtaacgtttgttcaagataaccaatctttctctactcgaggtgttttaagagga
ttacattatcaatgtggcgaacacgcccaagccaagttagttcgtgttttacaaggtgaa
gttttagatgttgccgttgatttacgtcctgaatcagaaacatttggtcaatatgaagcc
gttttactttcgagtgaaaatcaaaaacagttttttgtacctagaggttttgcacacgga
tttttagtgctatcagaaacggcaaccttcttttataaatgtgataatttttacaacaaa
gaaagtgaaggaggattaatttataatgacgaaaccctgaaaatcaattgggattttcct
tctcaagacttgattatttcagaaaaagaccaagtattacctaatctacaaaatgctaag
aaagtatggtag
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