Flagellatimonas centrodinii: JN531_009095
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Entry
JN531_009095 CDS
T07957
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
fce
Flagellatimonas centrodinii
Pathway
fce00521
Streptomycin biosynthesis
fce00523
Polyketide sugar unit biosynthesis
fce00541
O-Antigen nucleotide sugar biosynthesis
fce01100
Metabolic pathways
fce01110
Biosynthesis of secondary metabolites
fce01250
Biosynthesis of nucleotide sugars
Module
fce_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JN531_009095 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JN531_009095 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JN531_009095 (rfbC)
Enzymes [BR:
fce01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JN531_009095 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ULQ45283
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All DBs
Position
1947386..1947943
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AA seq
185 aa
AA seq
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MNIVETPLPGVLRLEPKVFGDARGFFVETYRAEQFLQQALEVRFVQDNQSRSRKGVLRGL
HYQLTQPQGKLVRVSRGQVFDVAVDVRRGSPHFGQAYGCVLDDVAHHQLYIPPGFAHGFL
VMSDEADFVYKCTDYYHPASEAGIRFNDPALAIDWPRLDVPFALSDKDRVLPMLADQSAL
PAGPS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgtcgaaacgcccttgccgggggtgctgcggctggagcccaaggtgtttggc
gatgcccgcgggttcttcgttgaaacctatcgcgccgaacagttcctgcaacaggcgctg
gaggtccgcttcgtgcaggacaaccagtcgcgctcacgcaagggggtgctgcgtggcctg
cactatcagctgacgcagccacagggcaagctggtgcgggtgtcgcgcggccaggtgttc
gacgtggcggtggacgtgcgtcgtggctcgccgcattttggccaggcctacggctgcgtg
ctggacgatgtggcgcatcaccagctctacattcccccgggctttgcccacggctttctg
gtgatgtctgacgaagccgacttcgtctacaagtgcaccgactattaccatccggcctcc
gaggcgggtatccgttttaacgacccggcgctggccatcgactggccccgccttgacgtg
cccttcgccttgtccgacaaggaccgggtgttgccaatgctggcggaccaatccgcgctt
cctgccggcccgtcatga
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