Falco cherrug (Saker falcon): 102050439
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Entry
102050439 CDS
T02911
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03250
Viral life cycle - HIV-1
fch04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102050439 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102050439 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fch03400
]
102050439 (SAMHD1)
DNA repair and recombination proteins [BR:
fch03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102050439 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Zw10_middle
Motif
Other DBs
NCBI-GeneID:
102050439
NCBI-ProteinID:
XP_027655104
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MACFVIWRPNPKQSLPAERLEVLACLNKVRQQHADMMKVFNDPIHGHIEIHPLLVCIIDT
PQFQRLRYIKQLGGTYFVFPGASHNRFEHSIGVGYLAGCVVRALKERQPELDITQRDILC
VEIAGLCHDLGHGPFSHMFDGRFIPLTRPSLKWKHETASVEMFEHLITSNKLEEVMKSYG
LVLEEDMTFIKEQIGGPIGGATCEASWPYHGRRKEKSFLYEIVANKKNGIDVDKWDYFAR
DCHHLGIQNNFDYKRLLKFIRVCEVENQKHICTRDKEVGNLYDMFHTRNCLHRRAYQHKI
GNIIEIMITEAFQKADKFFKIEGSGGKLYQISTAMEDMEAYTKLTDNIYLEILHSSCPEL
KEAREILQKLERRQLYKFLGETQPEKMMEIVKNNSLAESIANSRPEKDPPDVELKAEDFI
IDVVRMDYGMKEQNPIDNVLFYCKADPSKAVKISKEQVSKLLPMTFAEQIIRVYCKRQDA
DIVSAAKQYFIQWCIKKNFTKPQDGDVVAPHLIPMKESWNNTTDDEHRTASEPSCKQRLP
FDK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcatgctttgttatctggaggccaaacccaaaacaaagcctcccagctgagagactg
gaagtgctggcctgcctgaacaaagtgagacagcagcacgccgacatgatgaaggttttt
aacgatccgattcatgggcacattgaaatacatccccttcttgtttgtatcattgacaca
cctcagtttcagcgcctgagatacattaagcagctgggtggcacttactttgtttttcca
ggagcctctcacaaccgctttgagcactctataggggtgggctacctcgcaggatgtgtg
gttcgtgcactgaaggagagacaaccggaactggatataactcagcgagacattctctgc
gtagaaattgctgggctttgtcatgatttgggtcatgggccattttcacacatgtttgat
ggaagatttattccactcactcgtccaagtttgaagtggaagcatgaaactgcttctgtt
gaaatgtttgagcacctgatcacttccaataaactagaagaagtcatgaagtcatatgga
cttgtcctggaagaagatatgaccttcatcaaggaacaaataggagggcctataggtgga
gccacttgtgaggcatcatggccctaccatggtcgacggaaggagaaaagtttcctatat
gagatagtagctaacaaaaaaaatggcattgatgttgacaaatgggattattttgcaagg
gattgccatcacttaggaatccagaataattttgattataagcgattacttaaattcatt
cgggtctgtgaagtagaaaaccagaagcatatctgtacccgtgacaaggaagttggaaat
ttgtatgatatgttccacacacggaattgcctgcatcggcgagcataccagcataagatt
ggcaacatcattgaaataatgattacagaagcctttcaaaaagcagacaaattttttaaa
atagaaggctctggaggaaaactgtaccagatttctacagcaatggaggacatggaagcc
tacactaagctaactgataatatctacctggaaattctgcactcaagttgtccagaactg
aaggaggcacgagagatattgcagaaactagaacgacgtcaattatacaagttcttagga
gagactcaacctgaaaaaatgatggaaattgtaaagaataacagcctggcagaaagcatt
gctaattccaggccagaaaaggatcctccagatgtggagctaaaggccgaagatttcata
attgatgttgtccgtatggattatggaatgaaagaacagaatcccattgataatgttctc
ttctattgcaaggctgatccttccaaggcagtcaagatcagtaaagaacaggtttcaaag
cttttacccatgacgtttgcagagcagattattcgggtttattgcaaaagacaggatgca
gatattgtttcagctgcaaaacaatattttattcagtggtgtataaaaaagaatttcacc
aaaccacaggatggtgatgtggttgcccctcatctaattccaatgaaggaaagctggaac
aacacgacagatgatgaacacaggacagcttcagagcccagctgcaaacaaaggcttcct
tttgataagtaa
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