Fusobacterium canifelinum: I6I83_06080
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Entry
I6I83_06080 CDS
T07213
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
fci
Fusobacterium canifelinum
Pathway
fci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6I83_06080 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fci03400
]
I6I83_06080 (uvrA)
DNA repair and recombination proteins [BR:
fci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6I83_06080 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6I83_06080 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
nSTAND3
AAA_21
AAA_23
ATPase_2
AAA_24
Viral_helicase1
FtsK_SpoIIIE
cobW
AAA_33
DnaJ_CXXCXGXG
RNA12
Motif
Other DBs
NCBI-ProteinID:
QQS86620
LinkDB
All DBs
Position
complement(1235822..1238659)
Genome browser
AA seq
945 aa
AA seq
DB search
MIDKITIKGARQHNLKNIDIELPKNEFIVITGVSGSGKSSLAFDTIYSEGQRRYVESLSA
YARQFIGQMNKPEVDSIEGLSPAISIEQKTTNRNPRSTVGTITEVYDYLRLLFAHIGTAH
CPICHTAVEKQSVDEIVESVMTKFDDGSKIILLAPVVKDKKGTHKNIFLNLFKKGFVRAR
INGEVLYLEDEIELDKNKKHSIEVVVDRLVLKKDDKDFESRLTQSIETAIDLSNGKLIIN
DGKNDYLYSENYSCPNHEDVSIPELNPRLFSFNAPYGACPECKGLGKKLEVDENKLIENP
ELSIEDGGMYIPGAMARKGYSWEIFKAMAKVAKIDLTKPVKDLSQKDLDIIFYGYDEKFK
FDYTGGEFDFHGYKEYEGAVKNLERRYYETFSDAQKEEIENKYMVERICKVCNGKRLKDE
VLAVTVNGKNIMEICDMSIKNSLDFFMNMNLTEKQEKIAKEILKEIRERLTFMTNVGLDY
LTLSRETKTLSGGESQRIRLATQIGSGLTGVLYVLDEPSIGLHQKDNDKLLATLNRLKEL
GNTLIVVEHDEDTMMQADKILDIGPGAGEFGGDIVAFGSPKEIMKNKNSITGKFLSGKEA
IEIPKKRRKWNKSIKLYGAKGNNLKNIDVEFPLGVMTVVTGVSGSGKSTLVNSTLYPVLF
NKLNKGKLYPLEYKKIEGLDDLEKVINIDQTPIGRTPRSNPATYTKLFDDIRDIFAETQD
AKLHGFKKGRFSFNVKGGRCEACQGAGILKIEMNFLPDVYVECEVCKGKRYNKETLDVYY
KGKNIYDVLEMSVLEAYEFFKNIPSLERRLKVLIDVGLDYIKLGQPATTLSGGEAQRIKL
ATELSKMSKGNTVYILDEPTTGLHFQDIKKLLEVLNRLLEKGNTVIIIEHNLDVIKTADH
IIDIGVDGGENGGTVVATGTPEEIAKSKKSYTGKYIAKILKSKKK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgatagataaaattactataaagggagcaagacaacataatttaaaaaatatagatatt
gaactccctaaaaatgaatttattgtaataacaggtgtaagtggaagtggaaaatcatct
cttgcctttgatacaatttattcagaaggacaaagaagatatgtagaaagtctttcagct
tatgcgagacaatttataggacaaatgaataaaccagaagttgatagtatagaaggttta
tctcctgcaatctcaatagaacaaaaaacaacaaatagaaaccctcgttcaacagttggg
acaattacagaagtttatgattatttaagacttttatttgcacatataggaactgcacac
tgtccaatttgtcatacagcagttgaaaaacaaagtgtagatgaaattgttgaaagtgta
atgacaaaatttgatgatggaagcaaaattattttattagcacctgttgttaaagataaa
aaaggtactcataaaaatatatttttaaatttgtttaaaaaaggttttgtaagagcaaga
ataaatggggaagtactttatttagaagatgaaatagaacttgataagaataaaaaacat
agtatagaagttgttgtagatagattagttttaaaaaaagatgataaagattttgagagt
agattaactcaatcaatagaaactgcaatagatttatcaaatggaaaattaattataaat
gatggaaaaaatgattatctatatagtgaaaattattcttgtcctaatcatgaagatgta
agtattcctgaattaaatccaagattattttcattcaatgctccttatggagcttgtcct
gaatgtaaaggtttagggaaaaaactagaagttgatgaaaataaattaatagaaaatcca
gaattatccatagaagatggaggaatgtatattccaggagctatggcaagaaaaggatat
agctgggaaatttttaaagctatggcaaaagtggctaaaattgatttaactaaacctgtc
aaagatttaagtcaaaaagacttagatataatattctatggctatgatgaaaaatttaag
tttgactatactggtggagaatttgattttcatggctataaagaatatgaaggagctgtt
aaaaacttagaaagaagatactatgaaactttttcagatgcacaaaaagaagaaattgaa
aataagtacatggtagaaagaatttgtaaagtttgtaatggaaaaagattgaaagatgaa
gttttagcagtaactgtcaatggaaaaaatattatggaaatctgtgatatgagtattaaa
aactcacttgatttctttatgaatatgaatttaactgaaaaacaagaaaaaattgctaag
gaaattctaaaagaaataagggaaagattgacatttatgaccaatgttggtttagattat
ttaactctttcaagagaaactaaaactttatcaggtggagaatctcaaagaataagactt
gcaactcaaataggttctggacttacaggtgttctatatgtactagatgagccaagtata
ggcttacaccaaaaagacaatgataaattacttgcaactttaaatagacttaaagaattg
ggaaacactttaatagtggttgaacatgatgaagacacaatgatgcaagcagataaaatt
ctagatattggaccaggagctggagaatttggtggagatattgtagcttttggaagccca
aaagaaataatgaaaaataaaaactctatcacaggaaaatttttaagtggtaaagaagca
attgaaattcctaagaaaagaagaaaatggaataaatccattaaactttatggtgcaaaa
ggaaataatttaaaaaatattgatgtagaatttccattaggggttatgactgttgttact
ggagtaagtggaagtggtaaatcaactcttgtaaactcaactctatatccagttttattc
aataaattaaataaaggaaaattatacccattagaatataaaaaaattgaaggtttagat
gatttagaaaaagttatcaatatagatcaaactccaataggaagaactccaagatctaac
cctgcaacatatacaaaactttttgatgatataagagatatttttgctgaaactcaagat
gcaaaacttcatggatttaaaaaaggtagattttcatttaatgttaaaggtggaagatgt
gaagcttgtcaaggtgctgggatattaaaaattgaaatgaatttcttacctgatgtctat
gttgaatgtgaagtttgtaagggaaaaagatataataaagaaacattagatgtatattac
aaaggtaaaaatatttatgatgttttagaaatgagtgtacttgaagcctatgaattcttt
aaaaatattccatctttagaaagaagattaaaagttctaatagatgtaggtttggattat
ataaaactaggacaacctgcaacaactttatctggtggagaagcacaaagaattaaactt
gcaactgagctttcaaagatgagtaaaggaaatactgtatatattttagatgagcctaca
acaggactacactttcaagatattaaaaaattattagaagttttaaatagacttttagaa
aaaggaaatactgttataataattgagcataatcttgatgttataaaaactgctgaccat
ataattgatattggtgtagatggtggagaaaatggaggaactgttgttgctactggaaca
cctgaagaaattgcaaaatctaagaaaagttacacaggaaaatatattgctaaaatttta
aaaagtaagaaaaaatga
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