Flavobacterium collinsii: TRV642_3727
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Entry
TRV642_3727 CDS
T08703
Name
(GenBank) carbohydrate esterase family CE8 and polysaccharide lyase family PL10 protein precursor. Probable pectinesterase, pectate lyase
Organism
fcs
Flavobacterium collinsii
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Gene cluster
GFIT
Motif
Pfam:
Pec_lyase
Pectinesterase
Beta_helix
Pectate_lyase_3
Motif
Other DBs
NCBI-ProteinID:
CAI2768486
UniProt:
A0A9W4TM33
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Position
TRV642:complement(4281390..4283417)
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AA seq
675 aa
AA seq
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MISIKKYIVLTLFSICLGVKAQNTYKNWPDIIKKNDAAWFGTDEAKKIAENVLLYQREVG
GWPKNIQMQNELTPEQKKDLLKLKKTTAETTTDNGATCQEMLFMSKMYAQVKDDRYKESF
LKGFQYLLDAQYKNGGWPQFYPLKKGYYTHITYNDDSMVNILNTIRQVGEETDYFSIKPS
KAVVEKAKASLEKGIDCILKTQYKQNGVLTAWCAQHDEVTFAPANARAFELASLSGYESA
KIVLLLMSIEKPSSQIITAVQSAQAWFEKTKITNLEEKRILNEDGKIIDKKMIVTQNAAP
IWARFMDLSTNEPFFCDRDGIRKKSIDEIGAERRNGYSWYSDAPKEVLKKYPAWAAKNGL
KISAKESSDRQKNNFITVALDGSGDFTKIQDAINACPSFPYEKVTVFVKNGTYKEKIRIP
EWNSQVTLIGESKENTIITFDDNFSKINIGRNSTFNTYTLLVEGDDFSASNLTIKNASGD
NGQAIALSVVANRAQISNCNILGNQDTLYLSGKEAKQYIKDCYIEGTTDFIFGSATALFE
NCEIHSIKNSYITAASTPEGTAFGFVFKDCKLTAEPAATAVYLGRPWRIYAKTVYISCDM
AKHIRPEGWENWSKPEAEKTAFYAEYNCKGEGASSAKRVSWSHQLEKKEAEKYTIDNILK
DSIPNWYSGLTNVKQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaattaaaaaatacattgtattgactttgttcagtatttgcttaggagtaaag
gcgcagaatacctataaaaactggccggatattattaagaaaaacgatgcagcctggttt
ggtaccgatgaagcaaaaaaaatagcagagaatgtattgctctaccaaagagaggtaggc
gggtggccaaagaacattcaaatgcagaatgaattaacaccggagcagaaaaaggattta
ctgaagcttaaaaaaacaactgcagaaacgactacagacaatggggcaacgtgtcaggag
atgcttttcatgtctaaaatgtacgcgcaggtaaaagacgatcgatacaaagaatctttt
ttaaaagggttccagtatctgttggatgcacagtataaaaatgggggatggcctcagttt
tatccattgaaaaaaggctattatactcacattacttacaatgacgattctatggtgaac
atcctaaacaccattagacaagtgggtgaggaaacggattattttagtataaaaccttct
aaagcagtggttgaaaaagcaaaagcatctttagagaaaggaatcgactgcattttaaaa
acacaatacaaacaaaacggtgttttaactgcctggtgtgcacaacatgatgaagttact
tttgcgcctgcaaatgcaagagcatttgaattggcatcgttaagcggttacgaatcggct
aagattgtattgcttttaatgtcaatagaaaagccttcttcgcaaattataactgctgta
caaagtgctcaggcttggttcgaaaaaacgaaaatcaccaatcttgaagaaaaacgtatt
ttaaacgaggatggaaaaatcattgacaaaaaaatgatcgtaacacaaaatgcggctcca
atttgggctagatttatggatctttcgactaatgaacctttcttttgtgatcgtgacgga
atcaggaaaaaatcgatagatgagattggtgctgaaagacgaaacggttattcctggtat
tctgatgcacccaaagaagtactcaaaaaatatccggcctgggctgcaaaaaacggctta
aaaatttcggcaaaagaatcatcagataggcaaaagaacaactttattactgttgcttta
gacggttcgggtgattttacaaaaattcaggatgccataaatgcgtgtccttcttttcct
tatgaaaaggtaactgtttttgtgaaaaacggaacttacaaggagaaaatccgtattccc
gaatggaatagtcaagtgactctaattggtgaaagcaaagaaaatacgatcattactttt
gatgataacttctctaagattaacatcgggagaaacagcacttttaatacctataccctt
ttagtggaaggtgatgatttttcggcatccaatttaacgatcaaaaatgcttcgggtgat
aacggtcaagctattgcactgtctgttgtagcaaatagagctcagatttctaactgtaat
attctcggaaatcaggatactttgtacttgtcgggaaaggaagccaaacagtatatcaaa
gattgttatattgaaggaactaccgattttatctttggaagtgcaacagcgttatttgaa
aattgcgaaattcacagtatcaaaaactcttatattactgctgcttcaacacctgaagga
acagcttttggttttgtttttaaagattgcaaacttacagctgaacccgcggcaacggca
gtttatttaggaagaccctggcgtatttatgccaaaacagtttatatcagttgcgatatg
gcaaaacatatcagaccggaaggatgggaaaattggtcgaaacccgaagcggaaaaaaca
gctttttatgccgaatacaattgcaaaggcgaaggagcttcgtctgcaaaaagagtttcg
tggtcgcatcagcttgagaagaaagaagctgaaaaatatacgatagataacattttgaaa
gactcaattcccaactggtattcaggcctgacaaatgtaaagcaatag
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