Fundicoccus culcitae: NRE15_14315
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Entry
NRE15_14315 CDS
T09401
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
fct
Fundicoccus culcitae
Pathway
fct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NRE15_14315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fct03400
]
NRE15_14315
Enzymes [BR:
fct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NRE15_14315
DNA repair and recombination proteins [BR:
fct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NRE15_14315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
UvrD-helicase
AAA_22
AAA_28
HHH_3
nSTAND3
AAA_14
AAA_12
AAA_18
AAA_16
AAA_29
SLFN-g3_helicase
DUF4926
NACHT
gp32
cobW
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UUX34036
LinkDB
All DBs
Position
3160682..3163090
Genome browser
AA seq
802 aa
AA seq
DB search
MIDSRQEEEIVVGVVEAIIFENPSNLYKVIRVLVDEDNTSLFIGEDIVCTGQFATLHLDT
TYEFYGQLNNHPKYGQQFSVNRYQQMAPTSEEGLIEYLSSHRFKGVGTVLASRIVETLGT
DAIDKILSDSQALKEVPGLTQRTAKNLRDALIEHQGTERVYMQLNQWGFGPKTVDKIYQI
YQSTAIESIKENPYELIEKIDGIGFTKADQLAESLGFEADAIERVMAGIITVVNQQSVNE
GDTYVEEAVALSQAQKLLENSRRYLINEELLQEALDKAVLEKKLFRLAEGLMIPSLYYAE
IGIAKQLSQYWQYEAVERFTELEIQTAIPKVEELTGITYDKWQKEALIMAINSPMSIITG
GPGTGKTTLVQGLITLHSILHEYDLDDIDKLGNDNPVLLAAPTGRAAKRMKDITQLPAST
IHRLIGFTRDTSTEDFHSNELEGSLLIIDEMSMVDTWLMNWLLQGIPYHMQVVFVGDQDQ
LPSVGPGKVFNDLINSKVIPTVFLTKIYRQAENSSIIKLAHAIRKNQLPDDLLIKQADRS
FIPCHANQVSHVIHQIVEKAIPKGFNANNMQVLAPMYKGPAGINALNKSLQAQLNPASPK
KHELVYFETIFRVGDKVLQLVNNAEENVFNGDVGKIVSIYYKDQTDSKTDEMIVEFDEKE
LTYKRSDFNQLTLAYCTSIHKAQGSEYPLVILPLVDQYSRMLRKDILYTAVTRAQSSLIL
LGDPNCFAKAVMRNDEPRKTFLADLLQVEFKDRLENISEDLETEPQPTPNKYQLTSNNYL
TADPMIGMEGISPYDFLPDNLT
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatagtaggcaggaagaagagatagtagtgggggttgtcgaagcgattattttt
gaaaaccctagtaatttatataaagtgatacgggttttagttgatgaagataataccagt
ctattcatcggggaagatattgtttgtaccggacaatttgccaccctccatctagatacg
acctacgaattttatggtcaactcaacaaccatccaaaatatggccaacaattcagcgtt
aatcgttatcaacaaatggctccgacttcagaagaaggcctcattgagtatttatcgagt
catcgcttcaaaggtgttggaacggtcttagccagtcggatagttgaaacattgggaaca
gatgctattgataaaatactatccgatagtcaagcgttaaaagaagttcctggtttgaca
caaagaacggcaaaaaatttacgggatgccctgatagaacatcaaggaactgaacgggtt
tatatgcaattaaatcaatgggggtttggtcctaaaaccgttgataaaatttatcaaatt
tatcaaagtaccgccatcgaatccattaaagaaaatccttatgaattaatcgagaaaatc
gatggtattggctttactaaagccgatcaattagccgagtcccttggttttgaagccgat
gcgattgagcgggttatggcggggattattaccgtagtaaaccagcaatccgtcaatgaa
ggggatacctatgttgaagaagcggttgcgctatcacaagcacaaaaactgcttgaaaat
agtcggcgatatttaattaatgaggaattattgcaagaagcactcgataaagcggtgtta
gaaaaaaagctgtttcgcttagccgaaggcttaatgattcctagtttgtactacgctgaa
ataggcattgcgaagcaattgtcgcagtattggcaatatgaagcggtcgaacgatttaca
gaattagaaatccaaacggctataccaaaggtagaagaactgacgggtatcacttacgat
aagtggcaaaaagaggctttaataatggctattaattcgcctatgtctattattacggga
ggacctggaactgggaaaaccaccttagtccaaggcttgattaccttacattcgattttg
catgagtatgatttagatgatatcgataaattgggtaatgataatcctgtcctattagcg
gccccaactggtcgggctgctaaacggatgaaagatattactcagctaccggcatcaaca
atccatcgtttaatcggctttacacgtgatacctcaaccgaggattttcattccaatgaa
ttagaaggtagtttgttgattattgatgaaatgtccatggtcgacacatggttgatgaat
tggcttctgcaagggataccttatcatatgcaggtagttttcgttggtgaccaggatcag
ctaccgtctgttggaccgggtaaagttttcaatgatttaatcaattcaaaagttattcct
acggtgtttttaacgaaaatttatcgtcaagcggagaatagttcgattataaaattagca
cacgctattagaaagaatcaactacccgatgatttattaatcaaacaagccgatcgctca
tttattccttgtcatgccaatcaagtcagccatgttattcaccaaattgttgaaaaagcg
ataccgaaaggttttaatgctaacaatatgcaagtcttggctccaatgtataagggtcct
gctgggataaacgctttaaataaatccttacaggctcagttaaatcccgccagtcccaaa
aaacatgaattagtatactttgaaacaattttccgtgttggtgataaggtcctgcaatta
gtcaataacgctgaagaaaatgtgtttaatggtgatgttggcaagattgtttcgatttac
tataaggatcaaacggattctaagacggacgaaatgattgttgaattcgatgaaaaagaa
ctgacttataaacgcagtgattttaatcaactgacattagcctattgtacatcgattcat
aaggctcaaggcagtgagtacccactagttattttgcctttagtcgatcaatattcacga
atgctaagaaaagatattctgtatacggctgttacccgagcgcaatctagcttaattttg
ttaggtgatcccaactgttttgctaaagcggttatgcgcaatgatgagccgcggaaaacc
tttttagccgatttattacaggttgaattcaaagaccgactagaaaatatctcagaagac
ctagaaacagaaccccagccaacccccaataaatatcaactaacatccaacaattatttg
acggctgaccccatgataggtatggaaggtattagcccttatgattttttaccagacaat
cttacataa
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