Flavobacterium cerinum: NOX80_10880
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Entry
NOX80_10880 CDS
T09039
Name
(GenBank) IS3 family transposase
Organism
fcu
Flavobacterium cerinum
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
rve
rve_3
rve_2
HTH_Tnp_1
HTH_21
HTH_23
HTH_Tnp_1_2
DDE_Tnp_IS240
P22_Cro
HTH_17
Motif
Other DBs
NCBI-ProteinID:
UUC44137
LinkDB
All DBs
Position
complement(join(2439651..2440564,2440564..2440813))
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AA seq
387 aa
AA seq
DB search
MEKIRKKYTSEYKIFAVGLCEQYGSALRVAEELGISKNCLYHWRRSLGKEKLTLQKTSDP
DKRRKEMSRLRKEVRNIETERDIPKKGAKHLLQERRVRYEFIRENSDIFPVEKMCQVFQV
DRSCYYKWLKKIPTSRALRKVYITFEICRIYHSSRGTYGSPRITKELAAIGIKVCRSFVG
KIMTEHHLRSILKLKFKKTTISSPKHPVAENSLNQNFKVGRQNEVWVSDITYIRTAEGWA
YLTIIIDLFDRKVIGWSLSKSMKATDTSITALKKAQLSRPLVDNQKLMFHSDRGTQYTCK
DFVRILKSNQISQSMSRRGNCYDNAVAESFFKTLKVELIYHNKYTTRKKAEESIFEYIEN
FYNKRRRHSALGNLTIEEFKSLDTISY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagattaggaaaaaatacacctccgaatataaaatcttcgcggtcggcctatgc
gaacaatatggaagcgcacttcgcgtggccgaggaactgggtattagcaaaaactgcctc
tatcactggaggaggtctcttggaaaagaaaaacttacattacaaaaaacctccgacccg
gataagagaagaaaggaaatgtcaagattacgaaaggaggttaggaatatagaaaccgaa
cgcgatattcctaaaaaaggtgccaagcatcttctccaggagagacgggtaagatatgaa
ttcatcagggagaatagcgatatatttcccgtcgagaagatgtgccaagttttccaagtg
gaccgtagctgttattacaaatggctaaaaaagatccctaccagcagagcattacgcaaa
gtttatataacattcgagatttgtagaatatatcattcgagccgtggcacatacggaagt
ccaagaataaccaaagaattagcagccatagggataaaagtatgtcggtcttttgtcgga
aaaataatgacggaacatcatttgcgtagcattttaaaattgaaattcaaaaaaacaact
atttcctctcctaagcatcctgtcgcggagaacagtctaaaccaaaatttcaaggtggga
agacagaacgaagtatgggtatctgacataacctatatacgtacagcggagggctgggca
tacctcaccataattatagatttgtttgaccgaaaagtaataggttggtcgttaagcaaa
tcaatgaaggcaacagatacaagtataaccgctttaaaaaaggcgcagcttagtcgccct
ttagttgacaatcaaaaattgatgtttcattcagacagaggaacccaatatacctgtaaa
gattttgtccgcatattaaaaagtaaccagatctcacaaagtatgagcagaagaggtaac
tgttatgataacgcagtggctgaaagttttttcaagactttaaaagttgaactgatatat
cacaataaatatacaaccagaaaaaaagcagaagaatcgatttttgagtatatagaaaac
ttttacaataaacggagaaggcattctgctcttggaaatttaacaatagaagaatttaaa
agtctggacaccatttcctattga
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