Fragilariopsis cylindrus: FRACYDRAFT_174500
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Entry
FRACYDRAFT_174500 CDS
T04784
Name
(GenBank) cysteine proteinase
Organism
fcy
Fragilariopsis cylindrus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-ProteinID:
OEU07481
JGI:
174500
UniProt:
A0A1E7ENI9
LinkDB
All DBs
Position
Unknown
AA seq
1627 aa
AA seq
DB search
MGGWFGRYATRIFDKFCFKVRRDTCNLVLATPLLAEYALTWLKNAIDSIGVTSECTSEYF
HLLLKLVTDHKNVSPAELSSLATAVCMKLAACPRPSSETLISLDFQTGVLCGCLSLLEAL
IVHVGGSILVEGTNILLKEFSIARWSEVTEFQAAPSPEDLVLTDLMGVVFDAFLSPGGAT
SIMAICCNDVSRTQGFNVVRSAARSCKDGNGYIALVHRINGLVSAASPFLKHRWGQSAGG
NEGSTRNGRNTSKYSGLKNQGCTCYMNSVLQQLFMMPELRKSLCSAPLPASIRSSGGVVS
ARGAELVGKKVAMQWENGQSYFAIVEAFNSTSGMHTIKYSPIRIADGGSNHQQSVRNEDI
DRLPPLLSEEFFLSEGRPGKESGVFEVLLSEGAKGQKQENIVSSQDKPSECIKETEDESS
SRHLMEEVQRTFIHLEEGSRGRCFDPRALVEACACLKLEFDVWQQNDASEFSTKLLDRLE
TSLKRWAPDHFKYLDHTFGLKQTKQKICKECGLKSNREEKLLNVDCQIRGKSDIQEALAT
MCETEIMEGNNQVFCDNCRKNTDTVLRSAISELPNMLILSLKRFDLDYNTFETVKLNSRC
AFGQTLNMKRYTLEGVEAIEQQADTEDNQEGDAIAMDVGNDESAMSHLPDEDYEYKLAGV
LVHAGVAQGGHYYSFIKDRNPGSEEQWYRFDDEDVTPFDPASLALECFGGKVKKETKWPN
GVTNSVETEQFANALMLFYEKVKITEQPPSQDKTEQEGDVQDSNLKEIQMTTGYDVFEPD
VRRSNATHRWQSFLFDEHFQTFLGSLLHHCRLPNQDSNQSMDIAGNPESAETKKPPTWRK
NLIEMLVTYMFDVLLYANTRANLTDWTNTLEEIMTDDQECAQALAFKIASKTSSVGGNWL
RTYLLDCPIYPARFAFVRVLLATLRSCFSIPEEQKKLKAWIEAWRDQVLQIDAENNAIPC
LLQGKFAEYENLLSSSASIIGINLSFLNVLIDALPRSWKQHQELFLFIRNLTFTDPKYGG
NYFRHAMKLSLIPARMLGFVSRNGSPATLRTAFPGATVSIEAAETQAKSEQSQNLMGMNG
NQVMNHNTPDLSFRGNSNSMDFTPLFESIGVLMGIPSIIPATFLVEKEDQSGHKGFVLST
KATVALTEIFEESCDVSVQGMGQREIEDYLHRCGNEQVPPQRIVDIISKYNPTSSGGNGG
SKGRNYINLIGFLGYYRDTVREDLYAHGFRADLSRRPPELRMSVMDGREDAIKTCESIAR
DVAQLFDKVSSMGKLADDGLTAFEIFHHLQTNSSSEQLTEYILAAGLVRRRAHSEKLIHS
TLRHIYQAQTGWHGQEVLNTATVVLNTLSSISDQYQPERIHYIMLCSDKLTEHNHPIGLL
EAANIFRNMRPRSSGSYSHELFDPYDRYIQILKQMMQVTPVFEWMEDNRRYWQHIERDIF
EQYGNNDGNSSSRGDFSGRRDNDDTGNAIHLDHNHQQSDSDGIPGINESEDDDDDDSRFD
DNVNDNNVVDQYCDISKVIVSNAGNEEVNGNYMRDGICEGAHKFSKHGVFNGSDCTYSLF
KCNVSNNTQHWYISVVPHGTLPGTSNDIDFYSASVTPECHIFPPSNGWNKAAEGMHPPPS
IQVEKEI
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgggagggtggttcggaagatacgcgaccaggatcttcgacaagttctgtttcaaagta
cgccgagacacgtgcaatcttgtattggctaccccacttcttgcggagtatgccttaact
tggttgaagaatgcaatcgattcgattggagttacgtctgaatgcactagtgagtacttc
catctgttattgaaactagtaacagatcataagaatgtttcaccggcagaattgtcttct
ctagctactgcggtttgtatgaaacttgctgcctgccctagaccatcaagcgagactttg
atttcactcgattttcagactggtgttttgtgcggatgtctctcacttttggaagcatta
attgtacatgtcggtgggtcaattctagtggaagggacgaacatattactgaaagaattc
tcgatcgcacgatggtcagaggtgacggaatttcaagcagctccaagtcctgaagatttg
gtccttactgacttgatgggtgttgttttcgatgccttcctttcccccggcggagccaca
tcgattatggccatttgttgtaacgatgtgtcaagaacacaaggatttaacgtcgtaaga
tccgcagctcgtagttgtaaagatggaaatggctatattgctcttgtgcatagaataaat
ggattagtttctgctgcaagtccattccttaagcatcgatggggacaatctgccggaggg
aacgaaggcagtaccagaaatggcaggaacacttctaagtactccggactgaagaaccaa
ggctgtacttgctatatgaactctgtattacagcaacttttcatgatgccggaattgcgc
aaatcattgtgttcagcaccgttacctgcaagtattcggtcatccggtggagtcgtatct
gccagaggtgccgaactcgtcggtaaaaaggttgctatgcagtgggaaaatggccagtct
tactttgctattgttgaagcattcaacagcactagtggaatgcatacaataaaatacagt
cctatccgaatcgcagacggaggatcgaatcatcagcagtcggttcgtaacgaagatatt
gatagattgcctcctcttttatcggaagagtttttcctttcggaaggacgtcccgggaag
gaaagtggcgtatttgaggtgttattatctgaaggcgcaaaaggacaaaaacaagagaat
attgtttcgtcgcaggacaaaccatcggaatgtatcaaagaaaccgaggacgaatcttct
tctcgacatcttatggaggaagtacagcggacattcatccatcttgaagaagggtcgaga
ggtcgatgttttgacccacgtgcgctagttgaagcatgtgcctgcctaaaacttgagttt
gatgtttggcaacagaatgacgcgtccgaattctcgacgaagcttcttgataggttagaa
acttcattaaagcgatgggcaccggatcatttcaagtatctggatcatacgtttggtcta
aaacagactaaacaaaagatctgtaaagaatgcggacttaagtcgaaccgcgaggagaaa
ttattaaatgtcgactgtcaaatcagaggaaagtctgacattcaagaagcattagcaacc
atgtgcgaaaccgaaatcatggaagggaacaaccaggtgttttgtgacaattgtaggaag
aacacagatacggtgctacgatcggcaatttctgaattaccgaatatgctgatattgtct
ttaaagcgattcgacttggattacaatacgtttgagacagtcaaattgaacagtcgatgt
gcattcggtcagacattgaatatgaagcgatacactctagaaggcgtcgaagcaatcgaa
caacaagctgatacagaagataatcaagaaggagatgctattgctatggatgtgggcaac
gatgagagtgcaatgagtcatcttcctgacgaagactacgaatacaagttagccggtgtc
ctagttcatgctggtgttgcgcaaggtggccactattacagcttcatcaaagatcggaat
cctggatctgaagaacagtggtatcgattcgacgatgaagatgtaacacccttcgaccct
gcttcgcttgctttagaatgttttggtggaaaagtgaagaaagaaacgaaatggccgaac
ggtgttaccaactccgtcgaaaccgagcaattcgcaaatgccctcatgttattctacgaa
aaggtcaagattacagaacaacctccctcgcaagataaaactgaacaggagggggatgta
caggactctaatctgaaagaaatacagatgactacaggatacgacgttttcgaacccgat
gtgcgtagatctaatgcaactcacagatggcagtcatttttgttcgatgaacactttcaa
acgtttcttggaagtctacttcatcactgccgcttgcctaatcaggattccaatcagtcg
atggatatagcaggcaacccggaatccgccgaaacgaagaaaccaccgacttggcgaaag
aatttgatcgaaatgcttgtgacgtacatgttcgatgtgttactttacgcaaacacaaga
gcgaatctcacagactggacaaatacattagaagaaataatgactgatgatcaggagtgt
gcacaagcgcttgcatttaaaattgcatccaagacttcatctgttggtggaaactggctc
agaacttatcttttagactgtcccatctatccagctcgttttgctttcgttcgcgttctc
ctggcaacattacgatcgtgcttttcaattccagaggaacaaaagaagttaaaagcatgg
atagaggcatggagagatcaagtattacagatcgatgcagaaaataatgctattccttgc
cttttacaaggaaaatttgcggaatacgaaaatttactttcatcatctgcatctatcatc
ggcatcaatttatcttttcttaacgtcttgattgacgcattaccaagaagctggaagcaa
caccaggaactcttcctattcatacgaaaccttacatttactgatcccaaatatggcgga
aattactttcggcacgcgatgaaactaagtttgattcctgcacgcatgcttggctttgtc
agtcgcaacgggtctccagctacattgaggacggcattccctggagctacagtttcgatc
gaggctgcagaaactcaagcaaaatcagaacagtctcagaacctgatgggtatgaacggg
aatcaagtaatgaatcacaacacacccgacttaagttttcgaggtaactctaattcgatg
gatttcacacctttgttcgagtctataggagttttaatgggcattccatctataattcct
gcgacattccttgtggagaaagaagatcaaagtggacacaagggattcgttttatctaca
aaggccacagttgcactaactgaaatctttgaagagtcgtgcgatgtatctgtccaaggg
atggggcaacgagaaattgaagattatctacaccggtgtggcaacgaacaagttccaccg
caaagaattgttgatatcatatcgaagtacaaccctacatcaagcggaggaaatggcggt
tcgaaaggcaggaactacattaatttgattggctttttaggctactatagagatactgtt
cgcgaagatttgtatgcacatggttttagggccgatctctcgcgaagacctcccgagctt
agaatgtccgtaatggacggtcgagaagacgcaataaaaacttgtgagagtattgcacgc
gatgttgctcagttgtttgacaaggtttcgtctatgggaaaactagctgacgatggattg
accgccttcgaaattttccatcaccttcagactaactcgtcgagtgaacaactgactgaa
tatatattagctgcaggtctcgtccgacgacgtgctcattcggaaaaattgatccatagc
accctcagacacatctaccaggctcaaacaggctggcatggccaagaagttcttaatacc
gccaccgtggtcttaaatacattgtcttcaatttccgatcaataccaacccgagcgcata
cattatattatgttatgcagcgataaattgaccgaacacaatcaccctattggtttgttg
gaagcggcgaacatctttcgaaatatgagaccaaggtcgtcgggttcgtactcacacgaa
ttattcgacccgtatgatcgttatattcagattttgaagcaaatgatgcaagttacacct
gtattcgaatggatggaagacaatcgccgatattggcaacatatagagagagacatattt
gaacaatatggaaataatgatggtaactcatcatcaagaggtgacttttctggtagaaga
gataacgacgataccggaaatgcaatacacttggaccataatcaccaacaatccgattct
gatggtattcctggtatcaacgagtcggaagacgatgatgatgacgattcgcgcttcgac
gacaacgtcaacgacaacaacgtggtggatcaatattgcgacatctcgaaggttatcgtg
tcaaatgcaggtaacgaagaggtgaatggtaactatatgcgagacggtatttgtgagggt
gcacataaattcagtaaacacggggtatttaatggtagtgattgtacctattcgcttttc
aaatgcaatgtcagcaacaatacacagcactggtacatctctgtcgttccccatggaaca
ttaccaggaacaagcaatgatattgacttttattcggcttctgttacgccggaatgtcat
attttccctccatcgaatggatggaataaggccgccgaaggtatgcatccccctccaagt
attcaggtcgaaaaagaaatt
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integrated database retrieval system
